BLASTX nr result
ID: Coptis21_contig00020685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00020685
(422 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana] 121 5e-26
gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana] 121 5e-26
ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana] ... 121 5e-26
ref|NP_176501.1| pentatricopeptide repeat-containing protein [Ar... 121 7e-26
emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protei... 119 3e-25
>gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 121 bits (304), Expect = 5e-26
Identities = 58/129 (44%), Positives = 85/129 (65%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T GVV+NGLCK + D A L M++ K+ PGV IYN IIDGLCK ++DA+ LF+EM
Sbjct: 18 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 77
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
KG++ +VVT + L++C C+ GR + ++++R + PDVFTF+ L+ GKL
Sbjct: 78 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 137
Query: 396 VEAVELLEK 422
VEA +L ++
Sbjct: 138 VEAEKLYDE 146
Score = 85.5 bits (210), Expect = 4e-15
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +ING C D A ++F+ M P V YN +I G CK RV + + +F+EM
Sbjct: 158 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
S +G+ + VT N+L+ G D +F ++ G+ P++ T+ TLL GL +GKL
Sbjct: 218 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 277
Query: 396 VEAVELLE 419
+A+ + E
Sbjct: 278 EKAMVVFE 285
Score = 85.1 bits (209), Expect = 5e-15
Identities = 40/124 (32%), Positives = 72/124 (58%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+I+GLCK + D AL LFK M+ + P V Y+ +I LC R +DA RL +M +
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ DV T + L++ + G++ ++ ++KR ++P + T+++L+ G +H +L EA
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 176
Query: 408 ELLE 419
++ E
Sbjct: 177 QMFE 180
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V +G P N T +++GLCK+ + A+ +F+ + +K+ P + YN++I+G+CK +
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V D LF +S KGV+ DVV N +++ +C G + A+F + + G P+ + T
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 371
Query: 363 LLKGLSLHGKLVEAVELLEK 422
L++ G + EL+++
Sbjct: 372 LIRARLRDGDREASAELIKE 391
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/132 (29%), Positives = 74/132 (56%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T ++I GL ++ + D A ++FK M V P + YN ++DGLCK ++ A+ +F
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 284
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
+ + ++ + T N+++ C G+V+ G+ +F N+ +G++PDV + T++ G
Sbjct: 285 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344
Query: 387 GKLVEAVELLEK 422
G EA L ++
Sbjct: 345 GSKEEADALFKE 356
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
FT +I+ K A KL+ M + + P + Y+ +I+G C DR+++A ++F+
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
M K DVVT N L+ +C RV+ G VF + +RGL + T+ L++GL G
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 393 LVEAVELLEK 422
A E+ ++
Sbjct: 242 CDMAQEIFKE 251
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/132 (28%), Positives = 70/132 (53%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I+ LC A +L M E K++P V ++ +ID KE ++ +A +L+
Sbjct: 85 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 144
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
EM + + +VT + L+N +C R+D +F ++ + PDV T+ TL+KG +
Sbjct: 145 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 204
Query: 387 GKLVEAVELLEK 422
++ E +E+ +
Sbjct: 205 KRVEEGMEVFRE 216
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/126 (26%), Positives = 67/126 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +I G CK + +++F+ M + + YN++I GL + + A +F+EM
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
GV +++T N LL+ C G+++ VF + + +EP ++T+ +++G+ GK+
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312
Query: 396 VEAVEL 413
+ +L
Sbjct: 313 EDGWDL 318
>gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 121 bits (304), Expect = 5e-26
Identities = 58/129 (44%), Positives = 85/129 (65%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T GVV+NGLCK + D A L M++ K+ PGV IYN IIDGLCK ++DA+ LF+EM
Sbjct: 837 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 896
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
KG++ +VVT + L++C C+ GR + ++++R + PDVFTF+ L+ GKL
Sbjct: 897 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 956
Query: 396 VEAVELLEK 422
VEA +L ++
Sbjct: 957 VEAEKLYDE 965
Score = 95.9 bits (237), Expect = 3e-18
Identities = 49/136 (36%), Positives = 75/136 (55%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
GY + T G ++NG C+ A+ L M E P + YN IID LCK RVNDA
Sbjct: 253 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 312
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
F+E+ KG++ +VVT L+N C+ R + +++K+ + P+V T++ LL
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372
Query: 375 LSLHGKLVEAVELLEK 422
+GK++EA EL E+
Sbjct: 373 FVKNGKVLEAKELFEE 388
Score = 85.9 bits (211), Expect = 3e-15
Identities = 40/139 (28%), Positives = 78/139 (56%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V+ GY + +I+ LCK+ + A FK ++ + P V Y +++GLC R
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
+DA RL +M K + +V+T + LL+ + G+V +F +++ ++PD+ T+++
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 363 LLKGLSLHGKLVEAVELLE 419
L+ GL LH ++ EA ++ +
Sbjct: 404 LINGLCLHDRIDEANQMFD 422
Score = 85.5 bits (210), Expect = 4e-15
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +ING C D A ++F+ M P V YN +I G CK RV + + +F+EM
Sbjct: 977 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
S +G+ + VT N+L+ G D +F ++ G+ P++ T+ TLL GL +GKL
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 1096
Query: 396 VEAVELLE 419
+A+ + E
Sbjct: 1097 EKAMVVFE 1104
Score = 85.1 bits (209), Expect = 5e-15
Identities = 40/124 (32%), Positives = 72/124 (58%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+I+GLCK + D AL LFK M+ + P V Y+ +I LC R +DA RL +M +
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ DV T + L++ + G++ ++ ++KR ++P + T+++L+ G +H +L EA
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 408 ELLE 419
++ E
Sbjct: 996 QMFE 999
Score = 84.3 bits (207), Expect = 9e-15
Identities = 41/136 (30%), Positives = 74/136 (54%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
G N T +I G ++ + D A + F MD +SP + YN+++ GLC + A
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 522
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ +F++M + + D+VT ++ C G+V+ +++F ++ +GL+PD+ T+TT++ G
Sbjct: 523 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
Query: 375 LSLHGKLVEAVELLEK 422
L G L E L K
Sbjct: 583 LCTKGLLHEVEALYTK 598
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V +G P N T +++GLCK+ + A+ +F+ + +K+ P + YN++I+G+CK +
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V D LF +S KGV+ DVV N +++ +C G + A+F + + G P+ + T
Sbjct: 1131 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 1190
Query: 363 LLKGLSLHGKLVEAVELLEK 422
L++ G + EL+++
Sbjct: 1191 LIRARLRDGDREASAELIKE 1210
Score = 83.6 bits (205), Expect = 2e-14
Identities = 47/128 (36%), Positives = 70/128 (54%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +INGLC D A ++F M V YN +I+G CK RV D ++LF+EM
Sbjct: 400 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 459
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
S +G+ S+ VT N L+ + G VD F + G+ PD++T+ LL GL +G+L
Sbjct: 460 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 519
Query: 396 VEAVELLE 419
+A+ + E
Sbjct: 520 EKALVIFE 527
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/132 (29%), Positives = 74/132 (56%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T ++I GL ++ + D A ++FK M V P + YN ++DGLCK ++ A+ +F
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
+ + ++ + T N+++ C G+V+ G+ +F N+ +G++PDV + T++ G
Sbjct: 1104 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 1163
Query: 387 GKLVEAVELLEK 422
G EA L ++
Sbjct: 1164 GSKEEADALFKE 1175
Score = 80.5 bits (197), Expect = 1e-13
Identities = 41/132 (31%), Positives = 72/132 (54%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +++ K+ A +LF+ M + P + Y+ +I+GLC DR+++A ++F
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
M KG +DVV+ N L+N +C RV+ G +F + +RGL + T+ TL++G
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 481
Query: 387 GKLVEAVELLEK 422
G + +A E +
Sbjct: 482 GDVDKAQEFFSQ 493
Score = 78.6 bits (192), Expect = 5e-13
Identities = 40/137 (29%), Positives = 71/137 (51%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V G + + +ING CK+ + +KLF+ M + + YN +I G +
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V+ A F +M G+ D+ T N+LL C G ++ +F ++ KR ++ D+ T+TT
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 363 LLKGLSLHGKLVEAVEL 413
+++G+ GK+ EA L
Sbjct: 544 VIRGMCKTGKVEEAWSL 560
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
FT +I+ K A KL+ M + + P + Y+ +I+G C DR+++A ++F+
Sbjct: 941 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
M K DVVT N L+ +C RV+ G VF + +RGL + T+ L++GL G
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060
Query: 393 LVEAVELLEK 422
A E+ ++
Sbjct: 1061 CDMAQEIFKE 1070
Score = 73.6 bits (179), Expect = 2e-11
Identities = 38/128 (29%), Positives = 64/128 (50%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
+T +VIN C AL + M + P +++G C+ +RV+DA+ L +
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
M G + D+V N +++ C RV+ F F I ++G+ P+V T+T L+ GL +
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 393 LVEAVELL 416
+A LL
Sbjct: 344 WSDAARLL 351
Score = 72.4 bits (176), Expect = 4e-11
Identities = 40/136 (29%), Positives = 65/136 (47%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
GY N T ++NG C S A+ L M P +N +I GL ++ ++A
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ L M KG Q D+VT V++N C G D F + + + LEP V + T++ G
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 375 LSLHGKLVEAVELLEK 422
L + + +A+ L ++
Sbjct: 880 LCKYKHMDDALNLFKE 895
Score = 70.5 bits (171), Expect = 1e-10
Identities = 32/119 (26%), Positives = 67/119 (56%)
Frame = +3
Query: 66 KSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKGVQSDVV 245
+ + + A+ LF M +++ P + +N ++ + K + + I L ++M G+++D+
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224
Query: 246 TLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAVELLEK 422
T N+++NC+C +V ++ G +LK G EPD T +L+ G ++ +AV L++K
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/125 (28%), Positives = 66/125 (52%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+++ + K D + L + M + Y+++I+ C+ ++ A+ + +M G
Sbjct: 701 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 760
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ ++VTL+ LLN YCH R+ A+ + G +P+ TF TL+ GL LH K EA+
Sbjct: 761 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 820
Query: 408 ELLEK 422
L+++
Sbjct: 821 ALIDR 825
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/132 (28%), Positives = 70/132 (53%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I+ LC A +L M E K++P V ++ +ID KE ++ +A +L+
Sbjct: 904 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
EM + + +VT + L+N +C R+D +F ++ + PDV T+ TL+KG +
Sbjct: 964 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 1023
Query: 387 GKLVEAVELLEK 422
++ E +E+ +
Sbjct: 1024 KRVEEGMEVFRE 1035
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/126 (26%), Positives = 67/126 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +I G CK + +++F+ M + + YN++I GL + + A +F+EM
Sbjct: 1012 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 1071
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
GV +++T N LL+ C G+++ VF + + +EP ++T+ +++G+ GK+
Sbjct: 1072 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 1131
Query: 396 VEAVEL 413
+ +L
Sbjct: 1132 EDGWDL 1137
Score = 69.3 bits (168), Expect = 3e-10
Identities = 34/123 (27%), Positives = 70/123 (56%)
Frame = +3
Query: 54 NGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKGVQ 233
NGL + + D A+ LF M +++ P + ++ ++ + K ++ + I L ++M G+
Sbjct: 669 NGLSE-LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 234 SDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAVEL 413
+ T ++L+NC+C ++ AV G ++K G EP++ T ++LL G ++ EAV L
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 414 LEK 422
+++
Sbjct: 788 VDQ 790
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/130 (25%), Positives = 67/130 (51%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
+T +++ GLC + + AL +F+ M + ++ + Y +I G+CK +V +A LF
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
+S KG++ D+VT +++ C G + A++ + + GL + T + G
Sbjct: 564 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGD 615
Query: 393 LVEAVELLEK 422
+ + EL++K
Sbjct: 616 ITLSAELIKK 625
>ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2
[Arabidopsis thaliana]
Length = 630
Score = 121 bits (304), Expect = 5e-26
Identities = 58/129 (44%), Positives = 85/129 (65%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T GVV+NGLCK + D A L M++ K+ PGV IYN IIDGLCK ++DA+ LF+EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
KG++ +VVT + L++C C+ GR + ++++R + PDVFTF+ L+ GKL
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 396 VEAVELLEK 422
VEA +L ++
Sbjct: 343 VEAEKLYDE 351
Score = 85.5 bits (210), Expect = 4e-15
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +ING C D A ++F+ M P V YN +I G CK RV + + +F+EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
S +G+ + VT N+L+ G D +F ++ G+ P++ T+ TLL GL +GKL
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 396 VEAVELLE 419
+A+ + E
Sbjct: 483 EKAMVVFE 490
Score = 85.1 bits (209), Expect = 5e-15
Identities = 40/124 (32%), Positives = 72/124 (58%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+I+GLCK + D AL LFK M+ + P V Y+ +I LC R +DA RL +M +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ DV T + L++ + G++ ++ ++KR ++P + T+++L+ G +H +L EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 408 ELLE 419
++ E
Sbjct: 382 QMFE 385
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V +G P N T +++GLCK+ + A+ +F+ + +K+ P + YN++I+G+CK +
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V D LF +S KGV+ DVV N +++ +C G + A+F + + G P+ + T
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 363 LLKGLSLHGKLVEAVELLEK 422
L++ G + EL+++
Sbjct: 577 LIRARLRDGDREASAELIKE 596
Score = 83.6 bits (205), Expect = 2e-14
Identities = 39/132 (29%), Positives = 74/132 (56%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T ++I GL ++ + D A ++FK M V P + YN ++DGLCK ++ A+ +F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
+ + ++ + T N+++ C G+V+ G+ +F N+ +G++PDV + T++ G
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 387 GKLVEAVELLEK 422
G EA L ++
Sbjct: 550 GSKEEADALFKE 561
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/130 (31%), Positives = 68/130 (52%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
FT +I+ K A KL+ M + + P + Y+ +I+G C DR+++A ++F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
M K DVVT N L+ +C RV+ G VF + +RGL + T+ L++GL G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 393 LVEAVELLEK 422
A E+ ++
Sbjct: 447 CDMAQEIFKE 456
Score = 72.4 bits (176), Expect = 4e-11
Identities = 40/136 (29%), Positives = 65/136 (47%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
GY N T ++NG C S A+ L M P +N +I GL ++ ++A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ L M KG Q D+VT V++N C G D F + + + LEP V + T++ G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 375 LSLHGKLVEAVELLEK 422
L + + +A+ L ++
Sbjct: 266 LCKYKHMDDALNLFKE 281
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/125 (28%), Positives = 66/125 (52%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+++ + K D + L + M + Y+++I+ C+ ++ A+ + +M G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ ++VTL+ LLN YCH R+ A+ + G +P+ TF TL+ GL LH K EA+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 408 ELLEK 422
L+++
Sbjct: 207 ALIDR 211
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/132 (28%), Positives = 70/132 (53%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I+ LC A +L M E K++P V ++ +ID KE ++ +A +L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
EM + + +VT + L+N +C R+D +F ++ + PDV T+ TL+KG +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 387 GKLVEAVELLEK 422
++ E +E+ +
Sbjct: 410 KRVEEGMEVFRE 421
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/126 (26%), Positives = 67/126 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +I G CK + +++F+ M + + YN++I GL + + A +F+EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
GV +++T N LL+ C G+++ VF + + +EP ++T+ +++G+ GK+
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 396 VEAVEL 413
+ +L
Sbjct: 518 EDGWDL 523
Score = 69.3 bits (168), Expect = 3e-10
Identities = 34/123 (27%), Positives = 70/123 (56%)
Frame = +3
Query: 54 NGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKGVQ 233
NGL + + D A+ LF M +++ P + ++ ++ + K ++ + I L ++M G+
Sbjct: 55 NGLSE-LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 234 SDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAVEL 413
+ T ++L+NC+C ++ AV G ++K G EP++ T ++LL G ++ EAV L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 414 LEK 422
+++
Sbjct: 174 VDQ 176
>ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein;
64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis
thaliana] gi|23197834|gb|AAN15444.1| unknown protein
[Arabidopsis thaliana] gi|332195938|gb|AEE34059.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 121 bits (303), Expect = 7e-26
Identities = 58/129 (44%), Positives = 82/129 (63%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T G+V+NGLCK + D AL L K M++ K+ PGV IYN IID LC VNDA+ LF EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
KG++ +VVT N L+ C C+ GR + ++++R + P+V TF+ L+ GKL
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 396 VEAVELLEK 422
VEA +L ++
Sbjct: 343 VEAEKLYDE 351
Score = 82.0 bits (201), Expect = 5e-14
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
FT +ING C D A +F+ M P V YN +I G CK RV++ + LF+E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
MS +G+ + VT L++ + D VF ++ G+ PD+ T++ LL GL +GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 393 LVEAVELLE 419
+ A+ + E
Sbjct: 482 VETALVVFE 490
Score = 81.3 bits (199), Expect = 8e-14
Identities = 38/125 (30%), Positives = 72/125 (57%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+++ + K D + L + M +S + Y+++I+ C+ +++ A+ + +M G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ D+VTLN LLN +CH R+ ++ G +++ G +PD FTF TL+ GL H + EAV
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 408 ELLEK 422
L+++
Sbjct: 207 ALVDR 211
Score = 80.9 bits (198), Expect = 1e-13
Identities = 41/140 (29%), Positives = 78/140 (55%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V +G + T ++++GLC + + AL +F+ + +K+ P + YN++I+G+CK +
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V D LF +S KGV+ +VVT +++ +C G + A+F + + G PD T+ T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 363 LLKGLSLHGKLVEAVELLEK 422
L++ G + EL+ +
Sbjct: 577 LIRAHLRDGDKAASAELIRE 596
Score = 77.8 bits (190), Expect = 9e-13
Identities = 38/132 (28%), Positives = 73/132 (55%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I+G ++ D A +FK M V P + Y++++DGLC +V A+ +F
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
+ + ++ D+ T N+++ C G+V+ G+ +F ++ +G++P+V T+TT++ G
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 387 GKLVEAVELLEK 422
G EA L +
Sbjct: 550 GLKEEADALFRE 561
Score = 71.6 bits (174), Expect = 6e-11
Identities = 38/116 (32%), Positives = 61/116 (52%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I+ K A KL+ M + + P + Y+ +I+G C DR+++A +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ M K +VVT N L+ +C RVD G +F + +RGL + T+TTL+ G
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Score = 69.3 bits (168), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
G N +T ++IN C+ AL + M + P + N +++G C +R++DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ L +M G Q D T N L++ R A+ ++ +G +PD+ T+ ++ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 375 LSLHGKLVEAVELLEK 422
L G + A+ LL+K
Sbjct: 231 LCKRGDIDLALSLLKK 246
Score = 68.6 bits (166), Expect = 5e-10
Identities = 33/124 (26%), Positives = 67/124 (54%)
Frame = +3
Query: 45 VVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGK 224
+ IN L + D A+ LF M +++ P + ++ ++ + K ++ + I L ++M
Sbjct: 52 ISINRL-NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 225 GVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEA 404
G+ ++ T ++L+NC+C ++ AV ++K G EPD+ T +LL G ++ +A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 405 VELL 416
V L+
Sbjct: 171 VSLV 174
Score = 68.2 bits (165), Expect = 7e-10
Identities = 38/132 (28%), Positives = 68/132 (51%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I LC A +L M E K++P V ++ +ID KE ++ +A +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
EM + + D+ T + L+N +C R+D +F ++ + P+V T+ TL+KG
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 387 GKLVEAVELLEK 422
++ E +EL +
Sbjct: 410 KRVDEGMELFRE 421
Score = 65.5 bits (158), Expect = 4e-09
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
GY + T ++NG C A+ L M E P +N +I GL + +R ++A
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ L M KG Q D+VT +++N C G +D ++ + + +EP V + T++
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 375 LSLHGKLVEAVEL 413
L + + +A+ L
Sbjct: 266 LCNYKNVNDALNL 278
>emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (297), Expect = 3e-25
Identities = 57/129 (44%), Positives = 84/129 (65%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T GVV+NGLCK + D A L M++ K+ PGV IY IIDGLCK ++DA+ LF+EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM 282
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
KG++ +VVT + L++C C+ GR + ++++R + PDVFTF+ L+ GKL
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 396 VEAVELLEK 422
VEA +L ++
Sbjct: 343 VEAEKLYDE 351
Score = 86.3 bits (212), Expect = 2e-15
Identities = 40/124 (32%), Positives = 73/124 (58%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+I+GLCK+ + D AL LFK M+ + P V Y+ +I LC R +DA RL +M +
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ DV T + L++ + G++ ++ ++KR ++P + T+++L+ G +H +L EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 408 ELLE 419
++ E
Sbjct: 382 QMFE 385
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/140 (30%), Positives = 79/140 (56%)
Frame = +3
Query: 3 IVDNGYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDR 182
+V +G P N T +++GLCK+ + A+ +F+ + +K+ P + YN++I+G+CK +
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 183 VNDAIRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTT 362
V D LF +S KGV+ DVV N +++ +C G + A+F + + G P+ + T
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 363 LLKGLSLHGKLVEAVELLEK 422
L++ G + EL+++
Sbjct: 577 LIRARLRDGDREASAELIKE 596
Score = 81.6 bits (200), Expect = 6e-14
Identities = 43/128 (33%), Positives = 68/128 (53%)
Frame = +3
Query: 36 TSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEM 215
T +ING C D A ++F+ M P V Y+ +I G CK RV++ + LF+EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422
Query: 216 SGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKL 395
S +G+ + VT L+ G D +F ++ G+ P++ T+ TLL GL +GKL
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 396 VEAVELLE 419
+A+ + E
Sbjct: 483 EKAMVVFE 490
Score = 81.6 bits (200), Expect = 6e-14
Identities = 39/132 (29%), Positives = 73/132 (55%)
Frame = +3
Query: 27 NEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLF 206
N T +I GL ++ + D A ++FK M V P + YN ++DGLCK ++ A+ +F
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 207 QEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLH 386
+ + ++ + T N+++ C G+V+ G+ +F N+ +G++PDV + T++ G
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 387 GKLVEAVELLEK 422
G EA L ++
Sbjct: 550 GSKEEADALFKE 561
Score = 75.9 bits (185), Expect = 3e-12
Identities = 41/130 (31%), Positives = 70/130 (53%)
Frame = +3
Query: 33 FTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQE 212
FT +I+ K A KL+ M + + P + Y+ +I+G C DR+++A ++F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 213 MSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGK 392
M K DVV+ + L+ +C RVD G +F + +RGL + T+TTL++GL G
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446
Query: 393 LVEAVELLEK 422
A E+ ++
Sbjct: 447 CDMAQEIFKE 456
Score = 75.1 bits (183), Expect = 6e-12
Identities = 41/136 (30%), Positives = 66/136 (48%)
Frame = +3
Query: 15 GYPFNEFTSGVVINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDA 194
GY N T ++NG C S A+ L M P +N +I GL ++ ++A
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 195 IRLFQEMSGKGVQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKG 374
+ L M KG Q D+VT V++N C G D F + + + LEP V +TT++ G
Sbjct: 206 VALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDG 265
Query: 375 LSLHGKLVEAVELLEK 422
L + + +A+ L ++
Sbjct: 266 LCKNKHMDDALNLFKE 281
Score = 70.5 bits (171), Expect = 1e-10
Identities = 36/125 (28%), Positives = 66/125 (52%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+++ + K D + L + M + Y+++I+ C+ ++ A+ + +M G
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
+ ++VTL+ LLN YCH R+ A+ + G +P+ TF TL+ GL LH K EAV
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV 206
Query: 408 ELLEK 422
L+++
Sbjct: 207 ALIDR 211
Score = 69.3 bits (168), Expect = 3e-10
Identities = 33/122 (27%), Positives = 65/122 (53%)
Frame = +3
Query: 48 VINGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKG 227
+I G CK+ D ++LF+ M + + Y +I GL + + A +F+EM G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 228 VQSDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAV 407
V +++T N LL+ C G+++ VF + + +EP ++T+ +++G+ GK+ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 408 EL 413
+L
Sbjct: 522 DL 523
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/123 (27%), Positives = 70/123 (56%)
Frame = +3
Query: 54 NGLCKSMNADAALKLFKAMDEAKVSPGVEIYNMIIDGLCKEDRVNDAIRLFQEMSGKGVQ 233
NGL + + D A+ LF M +++ P + ++ ++ + K ++ + I L ++M G+
Sbjct: 55 NGLSE-LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 234 SDVVTLNVLLNCYCHLGRVDFGFAVFGNILKRGLEPDVFTFTTLLKGLSLHGKLVEAVEL 413
+ T ++L+NC+C ++ AV G ++K G EP++ T ++LL G ++ EAV L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 414 LEK 422
+++
Sbjct: 174 VDQ 176