BLASTX nr result

ID: Coptis21_contig00020684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020684
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27323.3| unnamed protein product [Vitis vinifera]              150   2e-34
emb|CAN71711.1| hypothetical protein VITISV_013458 [Vitis vinifera]   138   8e-31
ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_003551669.1| PREDICTED: nucleolar protein 14-like [Glycin...   122   7e-26
ref|XP_003535271.1| PREDICTED: nucleolar protein 14-like [Glycin...   121   1e-25

>emb|CBI27323.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score =  150 bits (379), Expect = 2e-34
 Identities = 88/159 (55%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
 Frame = +1

Query: 109 LLKRVNDRNMHDPLETGLGEG---RHKSKKEVMEEIILKSKYXXXXXXXXXXXXXXXXKA 279
           LLK+VN  +M +  + GL EG   +HKSKKEVMEEII KSK+                KA
Sbjct: 147 LLKQVNAHDMQNQSQRGLMEGEENKHKSKKEVMEEIISKSKFY---------------KA 191

Query: 280 QKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALMNKGDSKENLIKKAEV 459
           QK+KD+EENE L E+LDK+FTSL+QSEALLSLT+P K+NAL AL+NK    E  +KK +V
Sbjct: 192 QKAKDREENEHLVEELDKNFTSLVQSEALLSLTRPDKVNALKALVNKSIPNE-YMKKDDV 250

Query: 460 NLPPLNESSKQDKPDSYDKNVKQMALEKRARPSDRTKTP 576
           +     +S KQ++PDSYDK + +M L+ RARPSDRTKTP
Sbjct: 251 SAMQHIKSFKQEQPDSYDKIIGEMTLDMRARPSDRTKTP 289


>emb|CAN71711.1| hypothetical protein VITISV_013458 [Vitis vinifera]
          Length = 815

 Score =  138 bits (348), Expect = 8e-31
 Identities = 78/135 (57%), Positives = 97/135 (71%)
 Frame = +1

Query: 172 RHKSKKEVMEEIILKSKYXXXXXXXXXXXXXXXXKAQKSKDKEENEELKEQLDKDFTSLL 351
           +HKSKKEVMEEII KSK+                KAQK+KD+EENE L E+LDK+FTSL+
Sbjct: 58  KHKSKKEVMEEIISKSKFY---------------KAQKAKDREENEHLVEELDKNFTSLV 102

Query: 352 QSEALLSLTQPSKMNALNALMNKGDSKENLIKKAEVNLPPLNESSKQDKPDSYDKNVKQM 531
           QSEALLSLT+P K+NAL AL+NK    E  +KK +V+     +S KQ++PDSYDK + +M
Sbjct: 103 QSEALLSLTRPDKVNALKALVNKSIPNE-YMKKDDVSAMQHIKSFKQEQPDSYDKIIGEM 161

Query: 532 ALEKRARPSDRTKTP 576
            L+ RARPSDRTKTP
Sbjct: 162 TLDMRARPSDRTKTP 176


>ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|222865054|gb|EEF02185.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  136 bits (343), Expect = 3e-30
 Identities = 81/158 (51%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
 Frame = +1

Query: 106 ALLKRVNDRNMHDPLETGLGEGRHKSKKEVMEEIILKSKYXXXXXXXXXXXXXXXXKAQK 285
           A+L+++N   +      G  E + K+KKEVM+E+ILKSK+                KAQK
Sbjct: 184 AILRQLNAHGLPQDAVHG-EENKPKTKKEVMQEVILKSKFF---------------KAQK 227

Query: 286 SKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALMNKGDSKENLIKKAEVNL 465
           +KDKEENE+L E+LDK FTSL+QS+AL SLT+P KMNAL AL+NK    E+ +KK E+ +
Sbjct: 228 AKDKEENEQLMEELDKSFTSLVQSQALSSLTEPGKMNALKALVNKDIPNEH-VKKDELPV 286

Query: 466 PPLNESSKQ-DKPDSYDKNVKQMALEKRARPSDRTKTP 576
               E+ KQ ++PDSYDK V +MA++ RARPSDRTKTP
Sbjct: 287 IQKPETFKQQEQPDSYDKLVYEMAIDSRARPSDRTKTP 324


>ref|XP_003551669.1| PREDICTED: nucleolar protein 14-like [Glycine max]
          Length = 811

 Score =  122 bits (305), Expect = 7e-26
 Identities = 79/161 (49%), Positives = 88/161 (54%), Gaps = 12/161 (7%)
 Frame = +1

Query: 130 RNMHDPLETGLGEG------------RHKSKKEVMEEIILKSKYXXXXXXXXXXXXXXXX 273
           R+M  P ET   +G            RHKSKKEVMEEII KSK+                
Sbjct: 85  RSMQIPGETSADDGEENVRPVMLYMLRHKSKKEVMEEIISKSKFY--------------- 129

Query: 274 KAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALMNKGDSKENLIKKA 453
           KAQK+KDKEENE L E+LDKDFTSL+QSEALLSLT+P+KMN                   
Sbjct: 130 KAQKAKDKEENENLVEELDKDFTSLVQSEALLSLTEPNKMN------------------- 170

Query: 454 EVNLPPLNESSKQDKPDSYDKNVKQMALEKRARPSDRTKTP 576
                        +KPD YDK VKQM LE RARPSDRTKTP
Sbjct: 171 -------------EKPDDYDKLVKQMGLEMRARPSDRTKTP 198


>ref|XP_003535271.1| PREDICTED: nucleolar protein 14-like [Glycine max]
          Length = 919

 Score =  121 bits (303), Expect = 1e-25
 Identities = 77/152 (50%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
 Frame = +1

Query: 130 RNMHDPLETGLGEG---RHKSKKEVMEEIILKSKYXXXXXXXXXXXXXXXXKAQKSKDKE 300
           R+M  P E    +G   RHKSKKEVMEEII KSK+                KAQK+KDKE
Sbjct: 183 RSMQIPGEISADDGEENRHKSKKEVMEEIISKSKFY---------------KAQKAKDKE 227

Query: 301 ENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALMNKGDSKENLIKKAEVNLPPLNE 480
           ENE L E+LDKDFTSL+ SEALLSLT+P+KMN                            
Sbjct: 228 ENENLVEELDKDFTSLVHSEALLSLTEPNKMN---------------------------- 259

Query: 481 SSKQDKPDSYDKNVKQMALEKRARPSDRTKTP 576
               +KPD YDK VKQM LE RARPSDRTKTP
Sbjct: 260 ----EKPDDYDKLVKQMGLEMRARPSDRTKTP 287


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