BLASTX nr result

ID: Coptis21_contig00020680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020680
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513976.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002301075.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_004160285.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM9...   123   2e-26
ref|XP_004136273.1| PREDICTED: protein FAM91A1-like [Cucumis sat...   123   2e-26
emb|CBI19204.3| unnamed protein product [Vitis vinifera]              120   9e-26

>ref|XP_002513976.1| conserved hypothetical protein [Ricinus communis]
           gi|223547062|gb|EEF48559.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1003

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 65/70 (92%)
 Frame = -1

Query: 214 SWDGSTVGGLGGKFEGSLVNGNILLHCLNSLLKFSAVLVQPLSKYDLDKSGRIITLDIPL 35
           SWDGST+GGLGGKFEG+LV G +LLHCLNSLLK+SAVLVQPLS+YDLDKSGR+IT+DIP 
Sbjct: 667 SWDGSTIGGLGGKFEGNLVKGGVLLHCLNSLLKYSAVLVQPLSRYDLDKSGRVITMDIPF 726

Query: 34  PLKNSDGAFA 5
           PL NSDG+ A
Sbjct: 727 PLNNSDGSIA 736


>ref|XP_002301075.1| predicted protein [Populus trichocarpa] gi|222842801|gb|EEE80348.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/68 (83%), Positives = 66/68 (97%)
 Frame = -1

Query: 214 SWDGSTVGGLGGKFEGSLVNGNILLHCLNSLLKFSAVLVQPLSKYDLDKSGRIITLDIPL 35
           SWDGST+GGLGGKFEG+LV G+ILLHCLNSLLK+SAVLVQPLSKYDLD+SGR+IT+D+PL
Sbjct: 41  SWDGSTIGGLGGKFEGNLVKGSILLHCLNSLLKYSAVLVQPLSKYDLDESGRVITVDVPL 100

Query: 34  PLKNSDGA 11
           PL NSDG+
Sbjct: 101 PLNNSDGS 108


>ref|XP_004160285.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM91A1-like [Cucumis
           sativus]
          Length = 998

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = -1

Query: 214 SWDGSTVGGLGGKFEGSLVNGNILLHCLNSLLKFSAVLVQPLSKYDLDKSGRIITLDIPL 35
           SWDGS +GGLGGKFEG+ V G++LLHCLN+LLK+SAVLVQPLSKYDLDK+GR IT+D+PL
Sbjct: 663 SWDGSNIGGLGGKFEGNFVKGSVLLHCLNALLKYSAVLVQPLSKYDLDKNGRAITVDVPL 722

Query: 34  PLKNSDGAFA 5
           PLKNSDG+ A
Sbjct: 723 PLKNSDGSIA 732


>ref|XP_004136273.1| PREDICTED: protein FAM91A1-like [Cucumis sativus]
          Length = 998

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = -1

Query: 214 SWDGSTVGGLGGKFEGSLVNGNILLHCLNSLLKFSAVLVQPLSKYDLDKSGRIITLDIPL 35
           SWDGS +GGLGGKFEG+ V G++LLHCLN+LLK+SAVLVQPLSKYDLDK+GR IT+D+PL
Sbjct: 663 SWDGSNIGGLGGKFEGNFVKGSVLLHCLNALLKYSAVLVQPLSKYDLDKNGRAITVDVPL 722

Query: 34  PLKNSDGAFA 5
           PLKNSDG+ A
Sbjct: 723 PLKNSDGSIA 732


>emb|CBI19204.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = -1

Query: 214 SWDGSTVGGLGGKFEGSLVNGNILLHCLNSLLKFSAVLVQPLSKYDLDKSGRIITLDIPL 35
           SWDGS +GGLG KFEG+LV G+ILLHCLNSLLK+SAVLVQPLS++DLD+SGRI+T+DIPL
Sbjct: 606 SWDGSAIGGLGSKFEGNLVKGSILLHCLNSLLKYSAVLVQPLSRHDLDESGRIVTMDIPL 665

Query: 34  PLKNSDGAFA 5
           PLKN DG+ A
Sbjct: 666 PLKNCDGSIA 675


Top