BLASTX nr result

ID: Coptis21_contig00020670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020670
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ00034.1| telomerase reverse transcriptase, partial [Nicoti...   105   4e-21
gb|AEB33870.1| telomerase reverse transcriptase, partial [Nicoti...   105   4e-21
gb|AEA72239.1| telomerase reverse transcriptase, partial [Nicoti...   105   4e-21
gb|AEA72235.1| telomerase reverse transcriptase, partial [Nicoti...   105   4e-21
emb|CBI24880.3| unnamed protein product [Vitis vinifera]              103   1e-20

>gb|AFJ00034.1| telomerase reverse transcriptase, partial [Nicotiana sylvestris]
          Length = 381

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = -2

Query: 256 YVTEVEGGKLDMFYYRKPTWEKMSSKGVTCLREQNYRLLSDKSLSSILRKNSFGFSKVRF 77
           YVTE E  K D+FYYRKPTWE + SK VTCLR+Q Y+ L+  S+  I+   SFGFSKVR 
Sbjct: 17  YVTEAEHEKQDIFYYRKPTWENIISKFVTCLRDQGYQELNVASVKKIIWNRSFGFSKVRL 76

Query: 76  CPKENGMRVLANLKASSKFPI 14
           CPK  G+R+LANLKAS+K P+
Sbjct: 77  CPKGKGVRMLANLKASAKLPV 97


>gb|AEB33870.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 673

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = -2

Query: 256 YVTEVEGGKLDMFYYRKPTWEKMSSKGVTCLREQNYRLLSDKSLSSILRKNSFGFSKVRF 77
           YVTE E  K D+FYYRKPTWE + SK VTCLR+Q Y+ L+  S+  I+   SFGFSKVR 
Sbjct: 62  YVTEAEHEKQDIFYYRKPTWENIISKFVTCLRDQGYQELNVASVKKIIWNRSFGFSKVRL 121

Query: 76  CPKENGMRVLANLKASSKFPI 14
           CPK  G+R+LANLKAS+K P+
Sbjct: 122 CPKGKGVRMLANLKASAKLPV 142


>gb|AEA72239.1| telomerase reverse transcriptase, partial [Nicotiana sylvestris]
          Length = 673

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = -2

Query: 256 YVTEVEGGKLDMFYYRKPTWEKMSSKGVTCLREQNYRLLSDKSLSSILRKNSFGFSKVRF 77
           YVTE E  K D+FYYRKPTWE + SK VTCLR+Q Y+ L+  S+  I+   SFGFSKVR 
Sbjct: 62  YVTEAEHEKQDIFYYRKPTWENIISKFVTCLRDQGYQELNVASVKKIIWNRSFGFSKVRL 121

Query: 76  CPKENGMRVLANLKASSKFPI 14
           CPK  G+R+LANLKAS+K P+
Sbjct: 122 CPKGKGVRMLANLKASAKLPV 142


>gb|AEA72235.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 673

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = -2

Query: 256 YVTEVEGGKLDMFYYRKPTWEKMSSKGVTCLREQNYRLLSDKSLSSILRKNSFGFSKVRF 77
           YVTE E  K D+FYYRKPTWE + SK VTCLR+Q Y+ L+  S+  I+   SFGFSKVR 
Sbjct: 62  YVTEAEHEKQDIFYYRKPTWENIISKFVTCLRDQGYQELNVASVKKIIWNRSFGFSKVRL 121

Query: 76  CPKENGMRVLANLKASSKFPI 14
           CPK  G+R+LANLKAS+K P+
Sbjct: 122 CPKGKGVRMLANLKASAKLPV 142


>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = -2

Query: 256 YVTEVEGGKLDMFYYRKPTWEKMSSKGVTCLREQNYRLLSDKSLSSILRKNSFGFSKVRF 77
           YVTE E GK D+FYY+K  WEK+++   TCL+EQ+YR L D S+  IL   SFGFS++RF
Sbjct: 543 YVTESEHGKNDLFYYQKSVWEKLTNSATTCLKEQSYRSLDDVSVGQILSDRSFGFSRLRF 602

Query: 76  CPKENGMRVLANLKASSKF 20
            PKENG+R LANL  SSKF
Sbjct: 603 RPKENGVRALANLNGSSKF 621


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