BLASTX nr result

ID: Coptis21_contig00020662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020662
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540455.1| PREDICTED: CBS domain-containing protein CBS...   166   3e-39
ref|XP_003543253.1| PREDICTED: CBS domain-containing protein CBS...   166   5e-39
ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBS...   165   7e-39
gb|AFK48516.1| unknown [Medicago truncatula]                          164   2e-38
ref|XP_002528574.1| conserved hypothetical protein [Ricinus comm...   159   4e-37

>ref|XP_003540455.1| PREDICTED: CBS domain-containing protein CBSX5-like [Glycine max]
          Length = 390

 Score =  166 bits (421), Expect = 3e-39
 Identities = 91/152 (59%), Positives = 106/152 (69%), Gaps = 5/152 (3%)
 Frame = -3

Query: 700 PITLASCDETVTTAITTLSAGDLMAYIDFGCPPEDMVQVVKARLKERNLQGMLE---LLD 530
           P TLA CDETV  A+ TLSAGDLMAYID G PPED+V+VVKARLKE+NL+ ML+   +L 
Sbjct: 233 PFTLACCDETVAAAMATLSAGDLMAYIDCGGPPEDLVRVVKARLKEKNLEKMLQEFTILS 292

Query: 529 ECXXXXXXXXXXXXXXXXXXXXXS--GRFNRSGSYSTRMVNSAEAIVCHPGSSLVAVMMQ 356
            C                     +  GR  RS SYS RMV  AEAIVCHP SSLVAVM+Q
Sbjct: 293 SCESSQLASSSSSSDEESTTRTPARSGRLARSSSYSARMVRKAEAIVCHPKSSLVAVMIQ 352

Query: 355 AIVHRINYVWVIEDDYSLVGIVTFTDILKVLQ 260
           AI HR+NY+WVIEDD SLVGIVTF+++LKV +
Sbjct: 353 AIAHRVNYLWVIEDDCSLVGIVTFSNMLKVFR 384


>ref|XP_003543253.1| PREDICTED: CBS domain-containing protein CBSX5-like [Glycine max]
          Length = 389

 Score =  166 bits (419), Expect = 5e-39
 Identities = 90/150 (60%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
 Frame = -3

Query: 700 PITLASCDETVTTAITTLSAGDLMAYIDFGCPPEDMVQVVKARLKERNLQGMLE---LLD 530
           P TLA CDETV  AI TLSAGDLMAYID G PPED+V++VKARLKE+N + ML+   +L 
Sbjct: 236 PFTLACCDETVAAAIATLSAGDLMAYIDCGGPPEDLVRLVKARLKEKNFEKMLQEFTILS 295

Query: 529 ECXXXXXXXXXXXXXXXXXXXXXSGRFNRSGSYSTRMVNSAEAIVCHPGSSLVAVMMQAI 350
            C                      GR  RS SYS RMV  AEAIVCHP SSLVAVM+QAI
Sbjct: 296 SCESSQSTSSDEELPTRTPARS--GRLARSSSYSARMVRKAEAIVCHPKSSLVAVMIQAI 353

Query: 349 VHRINYVWVIEDDYSLVGIVTFTDILKVLQ 260
            HR+NY+WVIEDD SLVGIVTF+++LKV +
Sbjct: 354 AHRVNYLWVIEDDCSLVGIVTFSNMLKVFR 383


>ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
           gi|302143038|emb|CBI20333.3| unnamed protein product
           [Vitis vinifera]
          Length = 394

 Score =  165 bits (418), Expect = 7e-39
 Identities = 92/159 (57%), Positives = 108/159 (67%), Gaps = 9/159 (5%)
 Frame = -3

Query: 700 PITLASCDETVTTAITTLSAGDLMAYIDFGCPPEDMVQVVKARLKERNLQGMLE--LLDE 527
           P TLA CDETV  AITTLS+GDLM+YID G PPE++V+ VK RLK+RNL+GMLE   LD 
Sbjct: 236 PFTLACCDETVAAAITTLSSGDLMSYIDCGGPPEEIVKTVKTRLKQRNLEGMLEEFALDS 295

Query: 526 CXXXXXXXXXXXXXXXXXXXXXS---GRFNRSGSYSTRMVNSAEAIVCHPGSSLVAVMMQ 356
                                     G+++RS SYS RMV  AEAIVCHPGSSLVAVM+Q
Sbjct: 296 SSTSSLSASSSDEESSPSPKTALYRPGKYSRSSSYSARMVRRAEAIVCHPGSSLVAVMIQ 355

Query: 355 AIVHRINYVWVIEDDYSLVGIVTFTDILKV----LQSVA 251
           AI HR+NYVWVIEDD  L GIVTF+ +LK+    LQS+A
Sbjct: 356 AIAHRVNYVWVIEDDCCLAGIVTFSSMLKIFREHLQSMA 394


>gb|AFK48516.1| unknown [Medicago truncatula]
          Length = 389

 Score =  164 bits (415), Expect = 2e-38
 Identities = 88/150 (58%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
 Frame = -3

Query: 700 PITLASCDETVTTAITTLSAGDLMAYIDFGCPPEDMVQVVKARLKERNLQGMLE---LLD 530
           P TLA CDETV  AITTLSAG LMAYID G PPED+V+VVKARLKE+NL+ +L+   L+ 
Sbjct: 234 PFTLACCDETVAAAITTLSAGGLMAYIDCGRPPEDLVRVVKARLKEKNLEKLLQEFTLMT 293

Query: 529 ECXXXXXXXXXXXXXXXXXXXXXSGRFNRSGSYSTRMVNSAEAIVCHPGSSLVAVMMQAI 350
                                  SG++ RS SYS + V  AEAIVCHP SSL+AVMMQAI
Sbjct: 294 SLTGDMSSSSSSDEESPGRSLTRSGKYARSSSYSAKYVRKAEAIVCHPKSSLIAVMMQAI 353

Query: 349 VHRINYVWVIEDDYSLVGIVTFTDILKVLQ 260
            +R+NY+WVIEDD+SLVGIVTF++ILKV +
Sbjct: 354 ANRVNYLWVIEDDWSLVGIVTFSNILKVFK 383


>ref|XP_002528574.1| conserved hypothetical protein [Ricinus communis]
           gi|223532018|gb|EEF33829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  159 bits (403), Expect = 4e-37
 Identities = 87/151 (57%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
 Frame = -3

Query: 700 PITLASCDETVTTAITTLSAGDLMAYIDFGCPPEDMVQVVKARLKERNLQGMLELLDECX 521
           P TLA CDETV  AITTLS+GDLMAYID G PPED+V+VV ARLK R L+ ML+      
Sbjct: 251 PFTLACCDETVAAAITTLSSGDLMAYIDCGGPPEDLVRVVMARLKHRGLEAMLQEFTNST 310

Query: 520 XXXXXXXXXXXXXXXXXXXXS----GRFNRSGSYSTRMVNSAEAIVCHPGSSLVAVMMQA 353
                               +    G+++RS SYS RMV  AEAIVCHP SSLVAVM+QA
Sbjct: 311 TSLVSFSTLSSSSSDEESTTTLHRSGKYSRSKSYSARMVRRAEAIVCHPKSSLVAVMIQA 370

Query: 352 IVHRINYVWVIEDDYSLVGIVTFTDILKVLQ 260
           I HR+NYVWVIE+D SLVGIVTF ++LKV +
Sbjct: 371 IAHRVNYVWVIEEDCSLVGIVTFCNMLKVFR 401


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