BLASTX nr result

ID: Coptis21_contig00020656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020656
         (1682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2...   264   6e-68
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...   259   2e-66
gb|ABR17868.1| unknown [Picea sitchensis]                             251   5e-64
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   240   9e-61
emb|CBI26735.3| unnamed protein product [Vitis vinifera]              232   2e-58

>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  264 bits (674), Expect = 6e-68
 Identities = 157/373 (42%), Positives = 220/373 (58%), Gaps = 6/373 (1%)
 Frame = +3

Query: 234  RAELKTFCLKMDGVGMRSFIMENRKDLVTNSDDVIYGFNYASDCGKLVLDALQGFYPLK- 410
            R++L + C +MD  G+R ++ +N        D +    + A D G  VLDA++GFY  K 
Sbjct: 133  RSDLMSLCERMDVKGLRKYMKQNASKWGEIRDRLSGAMSVAPDPGSFVLDAMEGFYSSKA 192

Query: 411  -SKKARGGELGAIRRTCVLLLEGLEVVKPEISEDVRGEAKKLAVDWRGKVSVGSDDQLEA 587
             SK  +  EL  +RRTC+ LLE L   KP +S++V   AKKLA++W+ KVS+  +  LEA
Sbjct: 193  NSKGDKDTELCRLRRTCLDLLEALAKNKPTLSKEVNERAKKLALEWKRKVSLNGESPLEA 252

Query: 588  LVFLQLLASYGLVNEFNVDEVLDLLVSIARRRQAVDLFRGLGFEDKISDFIQKLNSRGKQ 767
            L FL LL +Y L  EF+V E++D  V +AR RQAV L R +   +K +D IQKL   GKQ
Sbjct: 253  LGFLHLLVAYNLEKEFDVGELVDYFVIVARFRQAVVLCRAVDLGEKTADLIQKLIDSGKQ 312

Query: 768  IDAVKFVYAFDVVEKFPPVSFLKAYLKESKKVAQEVCKKGKNSVQSQNEAIAKETAYLRA 947
              AVKF++ F +V+KF PV  LKA+LKESK++ ++VC+ GKNS+  QNEA ++E   L++
Sbjct: 313  FLAVKFIFEFGLVDKFQPVPLLKAHLKESKRLTKKVCQDGKNSINQQNEARSREVKTLKS 372

Query: 948  IIKCIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVAAPSPVLKPQQHQQTGSKRLR 1127
             +  I+EYKL S++ R  + KRIE LEKQK     AA  A   P  +P++ QQ GSKR R
Sbjct: 373  ALVLIDEYKLGSEYPRMDLKKRIEMLEKQKA----AAASAVDEPSHQPKKQQQAGSKRPR 428

Query: 1128 VAGSTV----DVALPTIVPSSPTHLQPTRLFPEHMFPYTSSSNIYGLAGTASTLPHYMNP 1295
             + + V    + + P I P   +HLQP  L          ++  YG  G+ S    Y  P
Sbjct: 429  TSATAVQNSNNGSNPVIPPFKQSHLQPASLL--------LAAGPYGSVGSISPAILYAGP 480

Query: 1296 AAGPSGAAQLDIG 1334
             AGP G A+   G
Sbjct: 481  PAGPYGLARAGTG 493


>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
            gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
            [Ricinus communis]
          Length = 491

 Score =  259 bits (661), Expect = 2e-66
 Identities = 177/506 (34%), Positives = 267/506 (52%), Gaps = 30/506 (5%)
 Frame = +3

Query: 6    IAEALKSSSTKKQNLKKSFDLVKLNSSSLNSFTLEWTDLETHF---DXXXXXXXXXXXXX 176
            I  AL     KKQ LK+++D ++ +SS L+SF+L W+DL++HF                 
Sbjct: 15   IESALNLIDIKKQTLKRAYDDLQSHSSLLSSFSLSWSDLDSHFTSVQTALTRRFLRLQST 74

Query: 177  XXXXXKSQQHPLTESSVKVRAELKTFCLKMDGVGMRSFIMENRKDLVTNSDDVIYGFNYA 356
                   Q  P+ ++    R  L  FC KMDG G+R +I E+ ++      +++      
Sbjct: 75   RPGPETVQPEPVQDNPT--RKALVPFCEKMDGRGLRDYISEHSREREAIRAELVGLMGLV 132

Query: 357  SDCGKLVLDALQGFYPLKSKKARGGELGAIRRTCVLLLEGLEVVKPE--ISEDVRGEAKK 530
            SD G+++LDA++GFY  KSK  R  +L  +R++C+ LLE L  +KP+   S++V+ +AK 
Sbjct: 133  SDPGEMILDAMEGFYLSKSKGDRDVDLYRLRKSCLDLLEVLSEIKPKPKFSDEVKIKAKN 192

Query: 531  LAVDWRGKVSVGSDDQLEALVFLQLLASYGLVNEFN-VDEVLDLLVSIARRRQAVDLFRG 707
            LA +W+ KVS+  D   EAL FL L+ ++ L + F+ V+E+L+  V IAR +QA  L R 
Sbjct: 193  LAFEWKEKVSLNGDSPSEALGFLNLIVAFELKDMFDDVNELLNYFVVIARFKQATVLARD 252

Query: 708  LGFEDKISDFIQKLNSRGKQIDAVKFVYAFDVVEKFPPVSFLKAYLKESKKVAQEVCKKG 887
            +G  DKI+D +QKL   GKQ+ AVKF++ F + +KF P   L+ +LKESK+   +VCK+ 
Sbjct: 253  IGLGDKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPAPLLRDHLKESKEFTDKVCKEE 312

Query: 888  KNSVQSQNEAIAKETAYLRAIIKCIEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVA 1067
            KNSV++QNEA ++E   L+++++ I+E+ LE  +    ++KRIE LEKQK +RK    VA
Sbjct: 313  KNSVKAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDLEKRIEMLEKQKADRK----VA 368

Query: 1068 APSPVLKP-------------QQH---------QQTGSKRLRVAGSTVDVALPTIV--PS 1175
            APSP  +P             QQH         Q  G+KR R+A      A+P  +  PS
Sbjct: 369  APSPDNRPRQQPKKQQLSKKQQQHQGKQQAKKQQLKGNKRPRMAMLPGPAAVPISIAGPS 428

Query: 1176 SPTHLQPTRLFPEHMFPYTSSSNIYGLAGTASTLPHYMNPAAGPSGAAQLDIGAXXXXXX 1355
            S                  +S+  YGLAG     P   +P      ++   + +      
Sbjct: 429  SA----------------GASAGPYGLAGAGMCFPGNPSPVRAHPYSSNSHMSS------ 466

Query: 1356 XXXXXXXXXXXDRSTGFGRYGVLPTY 1433
                       DRS  FG YG  P Y
Sbjct: 467  --------SYYDRSAAFGGYGFPPQY 484


>gb|ABR17868.1| unknown [Picea sitchensis]
          Length = 601

 Score =  251 bits (640), Expect = 5e-64
 Identities = 145/350 (41%), Positives = 209/350 (59%), Gaps = 19/350 (5%)
 Frame = +3

Query: 192  KSQQHPLTESSVKV----RAELKTFCLKMDGVGMRSFIMENRKDLVTNSDDVIYGFNYAS 359
            K +  P T+S  KV    R++LKT C  MD  G+R +I+E+RKD     ++V    N A 
Sbjct: 152  KKEISPSTKSEAKVQAQVRSQLKTLCETMDSKGLRKYIIEHRKDAAGLRNEVPSALNSAI 211

Query: 360  DCGKLVLDALQGFYPLKSKKARGGELG--AIRRTCVLLLEGLEVV---------KPEISE 506
            D  +LVL++L+GFY L+ K +   E G  A+RR C LLLE L  V          P +  
Sbjct: 212  DPSRLVLESLEGFYSLEQKSSDKKESGLPALRRACTLLLESLVPVLADPILGVEHPVLPI 271

Query: 507  DVRGEAKKLAVDWRGKVSVGSD----DQLEALVFLQLLASYGLVNEFNVDEVLDLLVSIA 674
            +++ +AK +A +W+ K+++  D    + LEA  FLQLLA++G+ +EF+ D++  L++++A
Sbjct: 272  NIKEQAKGIADEWKSKINLEGDVANGNSLEAQAFLQLLATFGIASEFDKDDLCKLVLAVA 331

Query: 675  RRRQAVDLFRGLGFEDKISDFIQKLNSRGKQIDAVKFVYAFDVVEKFPPVSFLKAYLKES 854
            RRRQ  +L R LG E K+ D ++ L + G+QI+AV F +AF + EKFPPV  LK YLK++
Sbjct: 332  RRRQTPELCRSLGLESKMPDVVETLVNSGRQIEAVNFAHAFGLTEKFPPVPLLKEYLKDA 391

Query: 855  KKVAQEVCKKGKNSVQSQNEAIAKETAYLRAIIKCIEEYKLESQFSRESIDKRIEQLEKQ 1034
            KK +Q   K G NS  +QNEA  KE +  RA+IKCIEE+KLESQFS + + KR+ QLEK 
Sbjct: 392  KKASQASLKSGNNSTAAQNEANTKELSAYRAVIKCIEEHKLESQFSPDPLQKRVAQLEKA 451

Query: 1035 KVERKRAAIVAAPSPVLKPQQHQQTGSKRLRVAGSTVDVALPTIVPSSPT 1184
            K +RKR+A      P            KR R  G    V +P +  +  T
Sbjct: 452  KADRKRSAGAVKSQP------------KRPRANGGNAGVYMPPLSAAERT 489


>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
          Length = 533

 Score =  240 bits (612), Expect = 9e-61
 Identities = 137/361 (37%), Positives = 210/361 (58%), Gaps = 9/361 (2%)
 Frame = +3

Query: 240  ELKTFCLKMDGVGMRSFIMENRKDLVTNSDDVIYGFNYASDCGKLVLDALQGFYPLKSKK 419
            +L+  C  MD   +R +IM++  D  T   +++  F  A D  K+VLDAL GF+P  + +
Sbjct: 141  QLRLLCSAMDAEALRRYIMDHPNDRETLRSELLDAFQVARDPAKMVLDALTGFFPSNANE 200

Query: 420  ARGGELGAIRRTCVLLLEGLEVVKPEISEDVRGEAKKLAVDWRGKVSVGSDDQLEALVFL 599
                EL  +RR+CV +LE L +  PEI EDVR  AK LA +W+GKV VG D+ L+ + FL
Sbjct: 201  DGSSELHTMRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEWKGKVKVG-DNTLKPMGFL 259

Query: 600  QLLASYGLVNEFNVDEVLDLLVSIARRRQAVDLFRGLGFEDKISDFIQKLNSRGKQIDAV 779
             LLA+YGL ++++  E+L+LL+ + R R+   L RGL   DK+ D IQ L   GK   AV
Sbjct: 260  HLLAAYGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAV 319

Query: 780  KFVYAFDVVEKFPPVSFLKAYLKESKKVAQEVCKKGKNSVQSQNEAIAKETAYLRAIIKC 959
            KFV  F +  KFP ++ LK  ++ S+ VA++V K GK+S+QSQNEA +KE + L+ + K 
Sbjct: 320  KFVLEFKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQSQNEATSKEISALKLVTKY 379

Query: 960  IEEYKLESQFSRESIDKRIEQLEKQKVERKRAAIVAAPSPVLKPQQHQQTGSKRLRVAGS 1139
            I++Y L +++    +++RI++LE Q   R  A    A +P  +P+Q ++  SK+ +   +
Sbjct: 380  IKDYDLNNEYPGAPLEERIQKLESQMAARTAAKKRPALAPAPRPKQQKKQKSKQAQTT-A 438

Query: 1140 TVDVALP--------TIVPSSPTHLQPTRLFPEHMFPYTS-SSNIYGLAGTASTLPHYMN 1292
            T   ++P        T  P    HLQ   L P+   P+ + S+ +YG AG     P  + 
Sbjct: 439  TASPSVPSGAAGTSSTAAPFQQPHLQAPGLVPDGPVPFMNPSAGLYGFAGVPMGFPGNLG 498

Query: 1293 P 1295
            P
Sbjct: 499  P 499


>emb|CBI26735.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  232 bits (592), Expect = 2e-58
 Identities = 134/353 (37%), Positives = 205/353 (58%), Gaps = 9/353 (2%)
 Frame = +3

Query: 264  MDGVGMRSFIMENRKDLVTNSDDVIYGFNYASDCGKLVLDALQGFYPLKSKKARGGELGA 443
            MD   +R +IM++  D  T   +++  F  A D  K+VLDAL GF+P  + +    EL  
Sbjct: 1    MDAEALRRYIMDHPNDRETLRSELLDAFQVARDPAKMVLDALTGFFPSNANEDGSSELHT 60

Query: 444  IRRTCVLLLEGLEVVKPEISEDVRGEAKKLAVDWRGKVSVGSDDQLEALVFLQLLASYGL 623
            +RR+CV +LE L +  PEI EDVR  AK LA +W+GKV VG D+ L+ + FL LLA+YGL
Sbjct: 61   MRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEWKGKVKVG-DNTLKPMGFLHLLAAYGL 119

Query: 624  VNEFNVDEVLDLLVSIARRRQAVDLFRGLGFEDKISDFIQKLNSRGKQIDAVKFVYAFDV 803
             ++++  E+L+LL+ + R R+   L RGL   DK+ D IQ L   GK   AVKFV  F +
Sbjct: 120  GSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLEFKL 179

Query: 804  VEKFPPVSFLKAYLKESKKVAQEVCKKGKNSVQSQNEAIAKETAYLRAIIKCIEEYKLES 983
              KFP ++ LK  ++ S+ VA++V K GK+S+QS NEA +KE + L+ + K I++Y L +
Sbjct: 180  THKFPLIAILKDIVESSRDVARKVRKDGKHSLQSVNEATSKEISALKLVTKYIKDYDLNN 239

Query: 984  QFSRESIDKRIEQLEKQKVERKRAAIVAAPSPVLKPQQHQQTGSKRLRVAGSTVDVALP- 1160
            ++    +++RI++LE Q   R  A    A +P  +P+Q ++  SK+ +   +T   ++P 
Sbjct: 240  EYPGAPLEERIQKLESQMAARTAAKKRPALAPAPRPKQQKKQKSKQAQTT-ATASPSVPS 298

Query: 1161 -------TIVPSSPTHLQPTRLFPEHMFPYTS-SSNIYGLAGTASTLPHYMNP 1295
                   T  P    HLQ   L P+   P+ + S+ +YG AG     P  + P
Sbjct: 299  GAAGTSSTAAPFQQPHLQAPGLVPDGPVPFMNPSAGLYGFAGVPMGFPGNLGP 351


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