BLASTX nr result

ID: Coptis21_contig00020639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020639
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   107   1e-21
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   107   1e-21
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   106   2e-21
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   101   7e-20
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    98   6e-19

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/138 (43%), Positives = 80/138 (57%)
 Frame = +1

Query: 1    LKYFQEQRLSSVEQQTWVSKLLEYDYEICFRPGKHNQSADALSRSPQLGHLSALSGPIMD 180
            LK+  EQR+ +   Q WV+KL  YD+EI FRPG  N++ADALSR P    L AL  P   
Sbjct: 1605 LKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGXENKAADALSRIPISMELXALMVPSRI 1664

Query: 181  SLTTITTECFLHPALQPIISALQKDPASKQFFTLENNVLRYKGRIVVAPGSSWCLKLLEE 360
                I+++    P L  I   L  DP +   ++L++ +L YKGR+V+   S     LL+E
Sbjct: 1665 DTXLISSQVEADPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQE 1724

Query: 361  YHAAPAAGHSGFLRTYKR 414
             HA+   GHSGFL TYKR
Sbjct: 1725 GHASVVGGHSGFLXTYKR 1742


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/139 (42%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1    LKYFQEQRLSSVEQQTWVSKLLEYDYEICFRPGKHNQSADALSRSPQLGHL-SALSGPIM 177
            LK   +QR+ + EQQ W +KLL YD+EI ++PGK N+ ADALSR  + G L   ++    
Sbjct: 748  LKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGELCQGITSVQW 807

Query: 178  DSLTTITTECFLHPALQPIISALQKDPASKQFFTLENNVLRYKGRIVVAPGSSWCLKLLE 357
                 +  E      LQ II  LQ+D +S+  + L+  VL Y+GR+VV+  S     LL 
Sbjct: 808  KDEKLLREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLA 867

Query: 358  EYHAAPAAGHSGFLRTYKR 414
            E+H+ P  GHSGF RTY+R
Sbjct: 868  EFHSTPQGGHSGFYRTYRR 886


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  106 bits (265), Expect = 2e-21
 Identities = 62/138 (44%), Positives = 79/138 (57%)
 Frame = +1

Query: 1    LKYFQEQRLSSVEQQTWVSKLLEYDYEICFRPGKHNQSADALSRSPQLGHLSALSGPIMD 180
            LKY  EQR+ + EQQ W+SKL+ YDYEI ++PGK NQ+ADALSR+     L+    P + 
Sbjct: 799  LKYLLEQRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAADALSRNMTSPCLNVFFVPQVQ 858

Query: 181  SLTTITTECFLHPALQPIISALQKDPASKQFFTLENNVLRYKGRIVVAPGSSWCLKLLEE 360
                I  E   +P +Q I     K P  +Q +   N ++ Y  RIVV PGS     LL E
Sbjct: 859  VWDEIRHEANSNPYMQRIGQLATKQP--RQPYQWRNGLVCYNNRIVVPPGSPLIHCLLRE 916

Query: 361  YHAAPAAGHSGFLRTYKR 414
            +H  P  GHS  LRTYKR
Sbjct: 917  FHDTPMGGHSRILRTYKR 934


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1    LKYFQEQRLSSVEQQTWVSKLLEYDYEICFRPGKHNQSADALSRSPQLGHLSALSGPIMD 180
            LK+  EQR+   + Q WV+KLL Y +E+ ++PG  N++ADALSR P    LS+L+ P + 
Sbjct: 1904 LKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLENKAADALSRVPPAVQLSSLTAPALI 1963

Query: 181  SLTTITTECFLHPALQPIISALQK-DPASKQFFTLENNVLRYKGRIVVAPGSSWCLKLLE 357
             L  +  E      L+ +   LQ  +  +++ F++ + +LRYK R+V++  S+    +L 
Sbjct: 1964 DLLVVKKEVEEDIRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILY 2023

Query: 358  EYHAAPAAGHSGFLRTYKR 414
             YH +   GHSGFLRTYKR
Sbjct: 2024 TYHDSVIGGHSGFLRTYKR 2042


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 57/138 (41%), Positives = 77/138 (55%)
 Frame = +1

Query: 1   LKYFQEQRLSSVEQQTWVSKLLEYDYEICFRPGKHNQSADALSRSPQLGHLSALSGPIMD 180
           LK+  EQR+ +   Q WV+KL  YD+EI FRPG  N++ DALSR P    L+AL  P   
Sbjct: 466 LKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGMKNKAVDALSRIPISMELAALMVPSRI 525

Query: 181 SLTTITTECFLHPALQPIISALQKDPASKQFFTLENNVLRYKGRIVVAPGSSWCLKLLEE 360
             + I+++    P L  I   L  D  +   + L++ +L YKG +V    S     LL+E
Sbjct: 526 DTSLISSQVEADPCLAKIKQRLLDDLDAYPRYALDHGILIYKGCLVFPKASPLVPALLQE 585

Query: 361 YHAAPAAGHSGFLRTYKR 414
            HA+   GHSGFL TYKR
Sbjct: 586 GHASVVGGHSGFLWTYKR 603


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