BLASTX nr result

ID: Coptis21_contig00020634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020634
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26560.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255...   167   1e-39
emb|CBI37413.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002519960.1| protein with unknown function [Ricinus commu...   155   2e-36
ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa] ...   152   2e-35

>emb|CBI26560.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/155 (57%), Positives = 112/155 (72%)
 Frame = +2

Query: 2   QWFFRAGDTVMNEQADTHDKKRLFFSDLLNDNVLDCIVSKVIVIHVAPNVDLKSKSKSIA 181
           QWFFR  DTVM E+   H+KKRLF+S+L+NDN+LDCIVSKV +I + P+V+LKSKS  I 
Sbjct: 159 QWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNLKSKS--IL 216

Query: 182 SCDFYYDMKYSVEYSTFHTMVTDNXXXXXXXXXXXVIQETDMHGANPDLINIPSCKPAKS 361
            CDFYYDMKY ++YSTF TM  DN            ++   M+G  P+   + S KP K 
Sbjct: 217 PCDFYYDMKYLIDYSTFCTMEVDNSADRTNLSTSACLKTVHMNGIKPEFNRMSSHKPYKP 276

Query: 362 EISLLDLYSGCGGMSTGLCLGAKICPLNLVTRWAL 466
           E++LLD+YSGCGGMSTGLCLGAK+  ++LVTRWAL
Sbjct: 277 ELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWAL 311


>ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
          Length = 1789

 Score =  167 bits (422), Expect = 1e-39
 Identities = 87/158 (55%), Positives = 107/158 (67%), Gaps = 3/158 (1%)
 Frame = +2

Query: 2    QWFFRAGDTVMNEQADTHDKKRLFFSDLLNDNVLDCIVSKVIVIHVAPNVDLKSKSKSIA 181
            QWF+RA DTVM E+A +HDKKR+F S ++NDN LDCI+SKV V+ + P V L  K  SI 
Sbjct: 1116 QWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSL--KLDSIP 1173

Query: 182  SCDFYYDMKYSVEYSTFHTMVTDNXXXXXXXXXXXVIQET---DMHGANPDLINIPSCKP 352
              D+YYDMKY+VEYSTFHT+++             V   T   DM G          CKP
Sbjct: 1174 PFDYYYDMKYNVEYSTFHTLLSGKISPNCIETPLSVANTTFPEDMDG----------CKP 1223

Query: 353  AKSEISLLDLYSGCGGMSTGLCLGAKICPLNLVTRWAL 466
             K+E++LLDLYSGCGGMSTGLCLGAK+  +NLVT+WAL
Sbjct: 1224 DKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWAL 1261


>emb|CBI37413.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/156 (55%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   QWFFRAGDTVMNEQADTHDKKRLFFSDLLNDNVLDCIVSKVIVIHVAPNVDLKSKSKSIA 181
           QWF+RA DTVM E+A +HDKKR+F S ++NDN LDCI+SKV V+ + P V L  K  SI 
Sbjct: 52  QWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSL--KLDSIP 109

Query: 182 SCDFYYDMKYSVEYSTFHTMVTDNXXXXXXXXXXXVIQETDMHGANPDL-INIPSCKPAK 358
             D+YYDMKY+VEYSTFHT+++                ET +  AN     ++  CKP K
Sbjct: 110 PFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCI----ETPLSVANTTFPEDMDGCKPDK 165

Query: 359 SEISLLDLYSGCGGMSTGLCLGAKICPLNLVTRWAL 466
           +E++LLDLYSGCGGMSTGLCLGAK+  +NLVT+WAL
Sbjct: 166 AELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWAL 201


>ref|XP_002519960.1| protein with unknown function [Ricinus communis]
           gi|223541006|gb|EEF42564.1| protein with unknown
           function [Ricinus communis]
          Length = 734

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/156 (49%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   QWFFRAGDTVMNEQADTHDKKRLFFSDLLNDNVLDCIVSKVIVIHVAPNVDLKSKSKSIA 181
           QWF+RA DTV+ E+A  HDKKRLF+S ++NDN +DCI+SKV ++ +   +  KS   SI 
Sbjct: 43  QWFYRAEDTVIKEEAGFHDKKRLFYSTIMNDNPIDCIISKVRIVQLPSMIGSKS---SIR 99

Query: 182 SCDFYYDMKYSVEYSTFHTM-VTDNXXXXXXXXXXXVIQETDMHGANPDLINIPSCKPAK 358
           S DFY+DM+Y+V+YS+F T+ +  +           V++     G N  L N+ S +  K
Sbjct: 100 STDFYFDMEYNVDYSSFRTLLIGKHFCLRDNSSSPNVVEAVSTTGGNTSLENMRSSESNK 159

Query: 359 SEISLLDLYSGCGGMSTGLCLGAKICPLNLVTRWAL 466
           +E++LLDL+SGCGGMSTGLCLGAK+  ++LVTRWAL
Sbjct: 160 AELALLDLFSGCGGMSTGLCLGAKVSCVDLVTRWAL 195


>ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
           gi|222840890|gb|EEE78437.1| DNA methyltransferase
           [Populus trichocarpa]
          Length = 729

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/155 (50%), Positives = 105/155 (67%)
 Frame = +2

Query: 2   QWFFRAGDTVMNEQADTHDKKRLFFSDLLNDNVLDCIVSKVIVIHVAPNVDLKSKSKSIA 181
           QWF+RA DTVM E AD HD KRLF+S ++NDN +DCI+SKV V+ ++P V L  K  S  
Sbjct: 64  QWFYRAEDTVMKEAADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHL--KFHSTP 121

Query: 182 SCDFYYDMKYSVEYSTFHTMVTDNXXXXXXXXXXXVIQETDMHGANPDLINIPSCKPAKS 361
           + DFY+DM+Y V+YSTF T++T                 TD    +  + N+ +C   K+
Sbjct: 122 ASDFYFDMEYCVDYSTFRTLLTGKNLNSTPG--------TD----DISMENMSTCGSYKA 169

Query: 362 EISLLDLYSGCGGMSTGLCLGAKICPLNLVTRWAL 466
           +++LLDL+SGCGGMSTGLCLGAK+  ++LVTRWAL
Sbjct: 170 KLTLLDLFSGCGGMSTGLCLGAKVSCVDLVTRWAL 204


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