BLASTX nr result

ID: Coptis21_contig00020633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020633
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55540.1| hypothetical protein [Rosa rugosa]                      75   4e-12
ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...    75   6e-12
ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...    62   4e-08

>gb|AFP55540.1| hypothetical protein [Rosa rugosa]
          Length = 2445

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   PKVVISPQSKCIAALDSTGGLDVFELHEECSSLSIVDLSHSGHCQ-TAKCSIGKRKFVKD 181
           PKV+ISPQ+K +A LD TG L VF++ +E  SLS          Q T   S G+ K + D
Sbjct: 275 PKVLISPQAKFVATLDLTGRLHVFKMDKERFSLSKFTCRERYESQVTNNLSSGEGKELID 334

Query: 182 ITDFTWWSDWVLIIAKVSGVVSMIDIFT 265
           I DFTWWSD +L  AK SG+V+M+D+ +
Sbjct: 335 IVDFTWWSDHILTFAKRSGLVTMLDLLS 362


>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   KVVISPQSKCIAALDSTGGLDVFELHEECSSLSIVDLSHSGHCQ-TAKCSIGKRKFVKDI 184
           KV+ISP  K +A LD TG LD+F+L  EC SLS          Q T   S    KF+  I
Sbjct: 280 KVLISPHGKFVATLDLTGCLDIFKLDGECCSLSSFAYGMRNDSQETDNLSNEVGKFLNGI 339

Query: 185 TDFTWWSDWVLIIAKVSGVVSMIDIFT 265
            DFTWWSD  L++AK SG V M+DI +
Sbjct: 340 VDFTWWSDHTLVLAKRSGTVIMLDILS 366


>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
           predicted protein [Populus trichocarpa]
          Length = 2414

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   PKVVISPQSKCIAALDSTGGLDVFELHEECSSLSIVDLSHSGHCQ-TAKCSIGKRKFVKD 181
           PKV+ISPQ K +A LD TG L +F++ +E  SL           Q T+  + G+ + + D
Sbjct: 277 PKVLISPQGKFVATLDITGRLHIFKMDKESRSLVSFACEEQLRSQGTSNITNGQNELLND 336

Query: 182 ITDFTWWSDWVLIIAKVSGVVSMIDIFT 265
           I DFTWWSD ++ +AK  G+++M+DI T
Sbjct: 337 IVDFTWWSDRIMTLAKRGGILAMLDIVT 364


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
           predicted protein [Populus trichocarpa]
          Length = 2421

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   PKVVISPQSKCIAALDSTGGLDVFELHEECSSLSIVDLSHS-GHCQTAKCSIGKRKFVKD 181
           PKV+ISP  K +A LD +G L +F++ +E  SL I       G   T+  + G+ + + D
Sbjct: 297 PKVLISPLGKFVATLDISGCLHIFKMDKESRSLLIFAGEEKLGSQGTSNLTNGQNELLSD 356

Query: 182 ITDFTWWSDWVLIIAKVSGVVSMIDIFT 265
           + DFTWWSD ++ IAK  G V+M+DI T
Sbjct: 357 VVDFTWWSDHIMTIAKRGGTVTMLDIVT 384


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
           gi|223545226|gb|EEF46735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2429

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +2

Query: 5   PKVVISPQSKCIAALDSTGGLDVFELHEECSSLSIVDLSHSGHCQTAKCSIGKRK-FVKD 181
           PKV++SP+   +A LD +G L +F+L +E SSLS + +      Q       + K F+ D
Sbjct: 286 PKVLMSPEGNFVATLDISGCLYIFKLDKEQSSLSSIAVGGRFGSQVIDNLTNRHKEFLND 345

Query: 182 ITDFTWWSDWVLIIAKVSGVVSMIDI 259
             DFTWWSD ++ +A+  GV +M++I
Sbjct: 346 NIDFTWWSDHIVTLARRGGVFTMLNI 371


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