BLASTX nr result

ID: Coptis21_contig00020610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020610
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21939.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002278847.1| PREDICTED: glucosidase 2 subunit beta-like [...   171   7e-41
ref|XP_002326032.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002330713.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
gb|AAM63282.1| unknown [Arabidopsis thaliana]                         166   2e-39

>emb|CBI21939.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/110 (70%), Positives = 89/110 (80%), Gaps = 3/110 (2%)
 Frame = -1

Query: 325 VAIITPSSLTTIS---PLYGIHPQDEKYYLSTQLIKCKDGSKYFTKSRLNDNFCDCIDGT 155
           +A+I+   L T S   P+ GIHP DEKYY S Q IKCKDGSK+F K+R+NDNFCDCIDGT
Sbjct: 10  IALISAFFLITYSSALPILGIHPLDEKYYAS-QAIKCKDGSKFFNKARINDNFCDCIDGT 68

Query: 154 DEPGTSACPAGRFYCRNDGSRPQLLFSSRVNDHLCDCCDGSDEYDGGIIC 5
           DEPGTSACPAG+FYC+N GS P+ LFSS+VNDH CDCCDGSDEY G I C
Sbjct: 69  DEPGTSACPAGKFYCKNVGSTPKFLFSSQVNDHFCDCCDGSDEYSGSINC 118


>ref|XP_002278847.1| PREDICTED: glucosidase 2 subunit beta-like [Vitis vinifera]
          Length = 197

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/110 (70%), Positives = 89/110 (80%), Gaps = 3/110 (2%)
 Frame = -1

Query: 325 VAIITPSSLTTIS---PLYGIHPQDEKYYLSTQLIKCKDGSKYFTKSRLNDNFCDCIDGT 155
           +A+I+   L T S   P+ GIHP DEKYY S Q IKCKDGSK+F K+R+NDNFCDCIDGT
Sbjct: 10  IALISAFFLITYSSALPILGIHPLDEKYYAS-QAIKCKDGSKFFNKARINDNFCDCIDGT 68

Query: 154 DEPGTSACPAGRFYCRNDGSRPQLLFSSRVNDHLCDCCDGSDEYDGGIIC 5
           DEPGTSACPAG+FYC+N GS P+ LFSS+VNDH CDCCDGSDEY G I C
Sbjct: 69  DEPGTSACPAGKFYCKNVGSTPKFLFSSQVNDHFCDCCDGSDEYSGSINC 118


>ref|XP_002326032.1| predicted protein [Populus trichocarpa] gi|222862907|gb|EEF00414.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  170 bits (431), Expect = 1e-40
 Identities = 76/113 (67%), Positives = 93/113 (82%)
 Frame = -1

Query: 343 LVSLLFVAIITPSSLTTISPLYGIHPQDEKYYLSTQLIKCKDGSKYFTKSRLNDNFCDCI 164
           ++SL F+     SS+ ++SPL GIHP DEKY+  +Q+IKCKDGSK F++ RLNDNFCDC+
Sbjct: 17  IISLYFLG----SSVQSLSPLLGIHPLDEKYF-GSQVIKCKDGSKSFSRDRLNDNFCDCL 71

Query: 163 DGTDEPGTSACPAGRFYCRNDGSRPQLLFSSRVNDHLCDCCDGSDEYDGGIIC 5
           DGTDEPGTSACP+G+FYCRN GS P+ +FSSRVND +CDCCDGSDEY  GI C
Sbjct: 72  DGTDEPGTSACPSGKFYCRNAGSTPKFIFSSRVNDQICDCCDGSDEYGSGINC 124


>ref|XP_002330713.1| predicted protein [Populus trichocarpa] gi|222872317|gb|EEF09448.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/113 (67%), Positives = 90/113 (79%)
 Frame = -1

Query: 343 LVSLLFVAIITPSSLTTISPLYGIHPQDEKYYLSTQLIKCKDGSKYFTKSRLNDNFCDCI 164
           ++SL F+      S+ + SPL GIHP DEKY+  +Q+IKCKDGSK F++ RLNDNFCDC+
Sbjct: 32  IISLYFLV----PSVHSFSPLLGIHPLDEKYF-GSQVIKCKDGSKSFSRDRLNDNFCDCL 86

Query: 163 DGTDEPGTSACPAGRFYCRNDGSRPQLLFSSRVNDHLCDCCDGSDEYDGGIIC 5
           DGTDEPGTSACP G+FYCRN GS P  +FSSRVND +CDCCDGSDEYD GI C
Sbjct: 87  DGTDEPGTSACPRGKFYCRNAGSTPNFIFSSRVNDQICDCCDGSDEYDSGINC 139


>gb|AAM63282.1| unknown [Arabidopsis thaliana]
          Length = 647

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/110 (68%), Positives = 84/110 (76%)
 Frame = -1

Query: 334 LLFVAIITPSSLTTISPLYGIHPQDEKYYLSTQLIKCKDGSKYFTKSRLNDNFCDCIDGT 155
           LL  + I  SS     P  GI PQDEKYY S+  IKCKDGSK FTK++LND+FCDC DGT
Sbjct: 20  LLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCSDGT 79

Query: 154 DEPGTSACPAGRFYCRNDGSRPQLLFSSRVNDHLCDCCDGSDEYDGGIIC 5
           DEPGTSACP G+FYCRN G  P +LFSSRVND +CDCCDGSDEYDG + C
Sbjct: 80  DEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGQVSC 129


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