BLASTX nr result

ID: Coptis21_contig00020574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020574
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01787.1| Ac-like transposase [Arabidopsis thaliana]             72   5e-11
gb|AFW70945.1| hypothetical protein ZEAMMB73_831198 [Zea mays]         72   6e-11
ref|XP_002466098.1| hypothetical protein SORBIDRAFT_01g001190 [S...    72   6e-11
ref|XP_002463517.1| hypothetical protein SORBIDRAFT_01g001210 [S...    72   6e-11
tpg|DAA63001.1| TPA: hypothetical protein ZEAMMB73_683256 [Zea m...    70   1e-10

>dbj|BAB01787.1| Ac-like transposase [Arabidopsis thaliana]
          Length = 667

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = -2

Query: 264 KLLKNYLRSTMTQERLNGLALISIENDFLEKIDVESLIDDFATKTVKRAIFQ*HWLCWFC 85
           KL+KNYLRST+ QERLNGLALISIE + ++K+D + LI++FA    +R +F+     +FC
Sbjct: 578 KLIKNYLRSTVPQERLNGLALISIEQELVKKLDYQKLINEFAGAKARRIMFRHEEKLYFC 637

Query: 84  L--IVQVFSFVSRRQN 43
           L  ++ +F F   +QN
Sbjct: 638 LFFLLTIFLFNFLKQN 653


>gb|AFW70945.1| hypothetical protein ZEAMMB73_831198 [Zea mays]
          Length = 455

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = -2

Query: 264 KLLKNYLRSTMTQERLNGLALISIENDFLEKIDVESLIDDFATKTVKRAIF 112
           KLLKNYLRSTM+QERLNGLA+ SIE D L+ ID  ++++DFA+K  +R+IF
Sbjct: 404 KLLKNYLRSTMSQERLNGLAMCSIEKDILDTIDFNTILNDFASKNARRSIF 454


>ref|XP_002466098.1| hypothetical protein SORBIDRAFT_01g001190 [Sorghum bicolor]
           gi|241919952|gb|EER93096.1| hypothetical protein
           SORBIDRAFT_01g001190 [Sorghum bicolor]
          Length = 742

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = -2

Query: 264 KLLKNYLRSTMTQERLNGLALISIENDFLEKIDVESLIDDFATKTVKRAIF 112
           KLLKNYLRSTM+QERLNGLA+ +IE D L+ ID+ +++DDFA++  +R+IF
Sbjct: 691 KLLKNYLRSTMSQERLNGLAMCTIERDILDTIDLNTVLDDFASRNARRSIF 741


>ref|XP_002463517.1| hypothetical protein SORBIDRAFT_01g001210 [Sorghum bicolor]
           gi|241917371|gb|EER90515.1| hypothetical protein
           SORBIDRAFT_01g001210 [Sorghum bicolor]
          Length = 704

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = -2

Query: 264 KLLKNYLRSTMTQERLNGLALISIENDFLEKIDVESLIDDFATKTVKRAIF 112
           KLLKNYLRSTM+QERLNGLA+ +IE D L+ ID+ +++DDFA++  +R+IF
Sbjct: 653 KLLKNYLRSTMSQERLNGLAMCTIERDILDTIDLNTVLDDFASRNARRSIF 703


>tpg|DAA63001.1| TPA: hypothetical protein ZEAMMB73_683256 [Zea mays]
          Length = 938

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/51 (60%), Positives = 43/51 (84%)
 Frame = -2

Query: 264  KLLKNYLRSTMTQERLNGLALISIENDFLEKIDVESLIDDFATKTVKRAIF 112
            KLLKNYLRSTM+QERLNGLA+ SIE D ++ +D  +++DDFA++  +R+IF
Sbjct: 887  KLLKNYLRSTMSQERLNGLAMCSIEKDIVDTVDFNAVLDDFASRNARRSIF 937


Top