BLASTX nr result

ID: Coptis21_contig00020555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020555
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513093.1| conserved hypothetical protein [Ricinus comm...   113   2e-23
ref|XP_003537857.1| PREDICTED: uncharacterized protein LOC100784...   107   8e-22
ref|XP_002265393.1| PREDICTED: uncharacterized protein LOC100248...   106   2e-21
emb|CBI17731.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002297759.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>ref|XP_002513093.1| conserved hypothetical protein [Ricinus communis]
           gi|223548104|gb|EEF49596.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 452

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = -2

Query: 383 VNRQKEARVMYEKLQTHPNVTVRRKAQQFMFGFQAMEILKVKSSSLSVNTTDYGNYFEAF 204
           ++RQ EA+ MYEKLQ+HPN  V +KA+QFMF FQAME+LKV  SS    +T Y NYFEAF
Sbjct: 344 LSRQNEAQAMYEKLQSHPNAKVSKKARQFMFSFQAMEMLKVTGSSFLPESTGYQNYFEAF 403

Query: 203 VQDKTNNLLRVGEDEE--NVYQQLLPYILFLACPIIFVLYLAVRKG 72
           V+DKT      GE EE      Q LPY+LFL  P+  VL +AV+ G
Sbjct: 404 VEDKTKYSPGEGESEEEGGGLSQALPYVLFLVSPVFIVLLMAVQGG 449


>ref|XP_003537857.1| PREDICTED: uncharacterized protein LOC100784194 [Glycine max]
          Length = 442

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/106 (51%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
 Frame = -2

Query: 383 VNRQKEARVMYEKLQTHPNVTVRRKAQQFMFGFQAMEILKVKSSS-LSVNTTDYGNYFEA 207
           ++R  EAR MYEKL++HPN  V +KA+QFM+ FQAME++K+ + S   +  +DY NYF+A
Sbjct: 337 LSRSNEARGMYEKLKSHPNPKVSKKARQFMYSFQAMEMMKMTTGSQFYLKNSDYQNYFDA 396

Query: 206 FVQDKTNNLLRVGEDEENVYQQLLPYILFLACPIIFVLYLAVRKGI 69
           FV++K+N     G  +E+   Q+LPYILFL  PI  VL +AVRKGI
Sbjct: 397 FVENKSNYPGGDGPVQESAMNQVLPYILFLVSPIFVVLLIAVRKGI 442


>ref|XP_002265393.1| PREDICTED: uncharacterized protein LOC100248180 [Vitis vinifera]
          Length = 457

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/104 (52%), Positives = 73/104 (70%)
 Frame = -2

Query: 383 VNRQKEARVMYEKLQTHPNVTVRRKAQQFMFGFQAMEILKVKSSSLSVNTTDYGNYFEAF 204
           ++R  EARVMYE+LQTHPN  V +KA+Q +FGFQAME++KV +S L +  T Y N+FEAF
Sbjct: 357 LSRPDEARVMYERLQTHPNALVSKKARQLIFGFQAMEMMKV-TSQLPLKNTGYQNFFEAF 415

Query: 203 VQDKTNNLLRVGEDEENVYQQLLPYILFLACPIIFVLYLAVRKG 72
           ++DK N  L+   D E    Q LPYI+FL  PI  V  +A++KG
Sbjct: 416 IEDKANYSLK---DNEVELGQALPYIIFLVSPIFIVFLIALQKG 456


>emb|CBI17731.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/104 (52%), Positives = 73/104 (70%)
 Frame = -2

Query: 383 VNRQKEARVMYEKLQTHPNVTVRRKAQQFMFGFQAMEILKVKSSSLSVNTTDYGNYFEAF 204
           ++R  EARVMYE+LQTHPN  V +KA+Q +FGFQAME++KV +S L +  T Y N+FEAF
Sbjct: 354 LSRPDEARVMYERLQTHPNALVSKKARQLIFGFQAMEMMKV-TSQLPLKNTGYQNFFEAF 412

Query: 203 VQDKTNNLLRVGEDEENVYQQLLPYILFLACPIIFVLYLAVRKG 72
           ++DK N  L+   D E    Q LPYI+FL  PI  V  +A++KG
Sbjct: 413 IEDKANYSLK---DNEVELGQALPYIIFLVSPIFIVFLIALQKG 453


>ref|XP_002297759.1| predicted protein [Populus trichocarpa] gi|222845017|gb|EEE82564.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/104 (51%), Positives = 67/104 (64%)
 Frame = -2

Query: 383 VNRQKEARVMYEKLQTHPNVTVRRKAQQFMFGFQAMEILKVKSSSLSVNTTDYGNYFEAF 204
           ++R  EAR MYEKLQ+HPNV V + A+QFMF FQAME LK   S+ S  +T Y  YFE F
Sbjct: 209 LSRPNEARAMYEKLQSHPNVKVSKIARQFMFSFQAMEKLKFTGSNFSPTSTGYQYYFEKF 268

Query: 203 VQDKTNNLLRVGEDEENVYQQLLPYILFLACPIIFVLYLAVRKG 72
           V+DKT+        E  V  Q LPY++FL  PI  VL+ A+R G
Sbjct: 269 VEDKTSYPQGEAGIEIGVLNQALPYMIFLVSPIFMVLFAALRGG 312


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