BLASTX nr result

ID: Coptis21_contig00020554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020554
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142350.1| PREDICTED: uncharacterized protein LOC101208...   232   1e-58
emb|CBI34961.3| unnamed protein product [Vitis vinifera]              231   2e-58
ref|XP_002279925.1| PREDICTED: uncharacterized protein LOC100249...   230   5e-58
emb|CAN82133.1| hypothetical protein VITISV_002643 [Vitis vinifera]   230   5e-58
ref|NP_198835.1| RNA ligase/cyclic nucleotide phosphodiesterase ...   229   6e-58

>ref|XP_004142350.1| PREDICTED: uncharacterized protein LOC101208638 [Cucumis sativus]
           gi|449492681|ref|XP_004159070.1| PREDICTED:
           uncharacterized protein LOC101226201 [Cucumis sativus]
          Length = 183

 Score =  232 bits (592), Expect = 1e-58
 Identities = 119/182 (65%), Positives = 139/182 (76%)
 Frame = +3

Query: 381 MSQGFAIELYFDPALENQVLKAWNVLSLRQITSQLIKIESRPHITLFSIPFLELPKLEEV 560
           MSQGFAIELYFDPALENQVLKAWNVL+ RQI++QLI+IESRPHITLFS PFLE  K+E +
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 561 LKNFASTQEPLSLTFSSIGSFESTGNXXXXXXXXXXXXXRFQMQLWDELKKVNIEIGKEY 740
           +KNFAS QEPL+L+ SSIGS  S  N             +FQ QL + ++K  IEIG+EY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 741 CPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPVNGCGMDIALVEFSPVREVFSFALGKA 920
              SW+P C VAQ+VPK R+AEAF VLRDLKLPV+G  +DI LVEFSPVRE+FSF LG  
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 921 AE 926
            E
Sbjct: 181 VE 182


>emb|CBI34961.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  231 bits (590), Expect = 2e-58
 Identities = 119/187 (63%), Positives = 138/187 (73%)
 Frame = +3

Query: 366 FHLSTMSQGFAIELYFDPALENQVLKAWNVLSLRQITSQLIKIESRPHITLFSIPFLELP 545
           F  + MSQG+AIELYFDPALENQVLKAWNVL+ RQI++QLI+IESRPHITLFS P +E  
Sbjct: 70  FDSNAMSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPLIEPA 129

Query: 546 KLEEVLKNFASTQEPLSLTFSSIGSFESTGNXXXXXXXXXXXXXRFQMQLWDELKKVNIE 725
           +LE ++K+FA  QEPL L+FSSIGS  +  N             +F  QL D LKK  IE
Sbjct: 130 RLENIIKSFAGKQEPLPLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIE 189

Query: 726 IGKEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPVNGCGMDIALVEFSPVREVFSF 905
           IG+EY PDSW+P C VAQ+VPK R+ EAFSVLRDLKLPV G  MDI LVEFSPVRE+FSF
Sbjct: 190 IGEEYRPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSPVRELFSF 249

Query: 906 ALGKAAE 926
            L    E
Sbjct: 250 VLSNTLE 256


>ref|XP_002279925.1| PREDICTED: uncharacterized protein LOC100249281 isoform 1 [Vitis
           vinifera]
          Length = 183

 Score =  230 bits (586), Expect = 5e-58
 Identities = 118/182 (64%), Positives = 136/182 (74%)
 Frame = +3

Query: 381 MSQGFAIELYFDPALENQVLKAWNVLSLRQITSQLIKIESRPHITLFSIPFLELPKLEEV 560
           MSQG+AIELYFDPALENQVLKAWNVL+ RQI++QLI+IESRPHITLFS P +E  +LE +
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPLIEPARLENI 60

Query: 561 LKNFASTQEPLSLTFSSIGSFESTGNXXXXXXXXXXXXXRFQMQLWDELKKVNIEIGKEY 740
           +K+FA  QEPL L+FSSIGS  +  N             +F  QL D LKK  IEIG+EY
Sbjct: 61  IKSFAGKQEPLPLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEY 120

Query: 741 CPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPVNGCGMDIALVEFSPVREVFSFALGKA 920
            PDSW+P C VAQ+VPK R+ EAFSVLRDLKLPV G  MDI LVEFSPVRE+FSF L   
Sbjct: 121 RPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSPVRELFSFVLSNT 180

Query: 921 AE 926
            E
Sbjct: 181 LE 182


>emb|CAN82133.1| hypothetical protein VITISV_002643 [Vitis vinifera]
          Length = 183

 Score =  230 bits (586), Expect = 5e-58
 Identities = 118/182 (64%), Positives = 136/182 (74%)
 Frame = +3

Query: 381 MSQGFAIELYFDPALENQVLKAWNVLSLRQITSQLIKIESRPHITLFSIPFLELPKLEEV 560
           MSQG+AIELYFDPALENQVLKAWNVL+ RQI++QLI+IESRPHITLFS P +E  +LE +
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPLIEPARLENI 60

Query: 561 LKNFASTQEPLSLTFSSIGSFESTGNXXXXXXXXXXXXXRFQMQLWDELKKVNIEIGKEY 740
           +K+FA  QEPL L+FSSIGS  +  N             +F  QL D LKK  IEIG+EY
Sbjct: 61  IKSFAGKQEPLXLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEY 120

Query: 741 CPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPVNGCGMDIALVEFSPVREVFSFALGKA 920
            PDSW+P C VAQ+VPK R+ EAFSVLRDLKLPV G  MDI LVEFSPVRE+FSF L   
Sbjct: 121 RPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSPVRELFSFVLSNT 180

Query: 921 AE 926
            E
Sbjct: 181 LE 182


>ref|NP_198835.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
           [Arabidopsis thaliana] gi|10177506|dbj|BAB10900.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|34098925|gb|AAQ56845.1| At5g40190 [Arabidopsis
           thaliana] gi|37202088|gb|AAQ89659.1| At5g40190
           [Arabidopsis thaliana] gi|51968364|dbj|BAD42874.1|
           unknown protein [Arabidopsis thaliana]
           gi|51969122|dbj|BAD43253.1| unknown protein [Arabidopsis
           thaliana] gi|332007135|gb|AED94518.1| RNA ligase/cyclic
           nucleotide phosphodiesterase family protein [Arabidopsis
           thaliana]
          Length = 183

 Score =  229 bits (585), Expect = 6e-58
 Identities = 117/182 (64%), Positives = 138/182 (75%)
 Frame = +3

Query: 381 MSQGFAIELYFDPALENQVLKAWNVLSLRQITSQLIKIESRPHITLFSIPFLELPKLEEV 560
           MS+G+AIELYFDPALENQVLKAWNV + RQI+++LI  ESRPHITLFS  F +  +LE V
Sbjct: 1   MSEGYAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESV 60

Query: 561 LKNFASTQEPLSLTFSSIGSFESTGNXXXXXXXXXXXXXRFQMQLWDELKKVNIEIGKEY 740
           +KNF S QEP+S++FS+IGSF S  N             + Q QL D LKK +++IG+EY
Sbjct: 61  IKNFVSKQEPISISFSTIGSFSSDNNVLFLSPTPSLSLLQLQTQLCDMLKKESVDIGEEY 120

Query: 741 CPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPVNGCGMDIALVEFSPVREVFSFALGKA 920
             DSWVP C VA DVPK+R+AEAFSVLRDLKLPVNG GM+I LVEFSPVREVFSF LG  
Sbjct: 121 RVDSWVPFCPVALDVPKSRMAEAFSVLRDLKLPVNGYGMEIGLVEFSPVREVFSFPLGNT 180

Query: 921 AE 926
            E
Sbjct: 181 LE 182


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