BLASTX nr result

ID: Coptis21_contig00020549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020549
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72989.1| hypothetical protein VITISV_031850 [Vitis vinifera]   102   4e-20
ref|XP_002327662.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003612150.1| hypothetical protein MTR_5g021840 [Medicago ...    92   3e-17
ref|XP_002521667.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002866765.1| hypothetical protein ARALYDRAFT_920105 [Arab...    69   5e-10

>emb|CAN72989.1| hypothetical protein VITISV_031850 [Vitis vinifera]
          Length = 161

 Score =  102 bits (253), Expect = 4e-20
 Identities = 63/99 (63%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
 Frame = -1

Query: 274 MKSSLCIPRLRGINNS-------KNTGVSP-LSLLERFREAVFRLIMLTALSKTTRGCDN 119
           MKS LCIPRL   N S        N  +SP +SLLERFREAVFRLIMLTALSK T    +
Sbjct: 12  MKSHLCIPRLMRSNTSCKSSSSTTNNRLSPAMSLLERFREAVFRLIMLTALSKATS--HS 69

Query: 118 GSDHVPRSRPYYHQDQHNSDAVADCIEFIKKSASPEENR 2
           GS  VPRS  YY  + H+S+AVADCIEFIKKSASP +NR
Sbjct: 70  GSRDVPRS--YYPNEPHHSEAVADCIEFIKKSASPGDNR 106


>ref|XP_002327662.1| predicted protein [Populus trichocarpa] gi|222836747|gb|EEE75140.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 6/97 (6%)
 Frame = -1

Query: 280 RNMKSSLCIPRLRGINNS---KNTGVSPLSLLERFREAVFRLIMLTALSKTTRGCDNGS- 113
           + MKS LCIPRLR +N +   KN  +SP++LLERFR+AVFRL+ML+ALSK T      S 
Sbjct: 27  KRMKSHLCIPRLR-VNTTCTIKNHRLSPMTLLERFRQAVFRLMMLSALSKATHNAAGSSP 85

Query: 112 -DHVPRSR-PYYHQDQHNSDAVADCIEFIKKSASPEE 8
             HV + R  YY  D H+S+AVADCIEFIKKS+  ++
Sbjct: 86  DHHVMKKRSSYYPADPHHSEAVADCIEFIKKSSLTDQ 122


>ref|XP_003612150.1| hypothetical protein MTR_5g021840 [Medicago truncatula]
           gi|355513485|gb|AES95108.1| hypothetical protein
           MTR_5g021840 [Medicago truncatula]
          Length = 116

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
 Frame = -1

Query: 274 MKSSLCIPRLRGINNSKNTGVSPLSLLERFREAVFRLIMLTALSKTTRGCDNGSDHVPRS 95
           M    C+PRL+  N+ KN   SP++LLERFREAVFRL+M++A SKT      GS    R 
Sbjct: 1   MMKGQCMPRLKS-NSYKNKIPSPMTLLERFREAVFRLMMMSAFSKTATN-HGGSGDGERQ 58

Query: 94  RPYYHQDQHNSDAVADCIEFIKKSAS--PEENR 2
           R Y H D HNS+AVADCIEFIKK A+   EENR
Sbjct: 59  RRYSHYDTHNSEAVADCIEFIKKKAARDTEENR 91


>ref|XP_002521667.1| conserved hypothetical protein [Ricinus communis]
           gi|223539058|gb|EEF40654.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 14/99 (14%)
 Frame = -1

Query: 274 MKSSLCIPRLRGINNS-----KNTGVSPLSLLERFREAVFRLIMLTALSKTT------RG 128
           MKS LCIPRLRG +N+      N  +SP++LLERFREAVFRL+ML+ALSK T      R 
Sbjct: 1   MKSHLCIPRLRGSHNTTCTIKNNHRLSPMTLLERFREAVFRLMMLSALSKATHSTSRSRS 60

Query: 127 CDNGSDHVPRSRPYYHQ---DQHNSDAVADCIEFIKKSA 20
             + S   P  R YY+    D H+S+AVADCIEFIKK++
Sbjct: 61  RSSNSGGPPLKRSYYYSSSADPHHSEAVADCIEFIKKTS 99


>ref|XP_002866765.1| hypothetical protein ARALYDRAFT_920105 [Arabidopsis lyrata subsp.
           lyrata] gi|297312600|gb|EFH43024.1| hypothetical protein
           ARALYDRAFT_920105 [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
 Frame = -1

Query: 259 CIPRLRGINNSKNTG-----VSPLSLLERFREAVFRLIMLTALSKTTRGCDNGSDHVPRS 95
           C+PR++   N+++TG     V+ L+LL+RFREAV  LIM++A+SK+T    N +   P  
Sbjct: 10  CVPRVK--TNARSTGDREISVTSLTLLDRFREAVLHLIMISAVSKSTSRRHN-NKQTPTQ 66

Query: 94  RPYYHQDQHNSDAVADCIEFI--KKSASPEEN 5
           + Y   D ++S+AVADCIEFI  KK+   EEN
Sbjct: 67  KYYKTTDTYHSEAVADCIEFIRTKKAIINEEN 98


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