BLASTX nr result
ID: Coptis21_contig00020535
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020535 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ... 68 9e-10 emb|CBI29412.3| unnamed protein product [Vitis vinifera] 68 9e-10 emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera] 68 9e-10 ref|XP_002534164.1| minichromosome maintenance protein, putative... 64 1e-08 ref|XP_003534851.1| PREDICTED: DNA replication licensing factor ... 62 5e-08 >ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera] Length = 812 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/72 (55%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Frame = -3 Query: 445 QQNQKSAYGSXXXXXXXXXXXXXXXESLIRREGHLIVLDDGREAAEGGEDLSP----RDR 278 QQN+K+ Y S ESLIRREGHLIV+DDGR+AA GED P R+ Sbjct: 741 QQNEKNNYSSMEEAANEVSKLKAIIESLIRREGHLIVVDDGRQAAAEGEDGRPPSVSRND 800 Query: 277 RILAVAPNYVIE 242 RILAVAPNYVI+ Sbjct: 801 RILAVAPNYVID 812 >emb|CBI29412.3| unnamed protein product [Vitis vinifera] Length = 822 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/72 (55%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Frame = -3 Query: 445 QQNQKSAYGSXXXXXXXXXXXXXXXESLIRREGHLIVLDDGREAAEGGEDLSP----RDR 278 QQN+K+ Y S ESLIRREGHLIV+DDGR+AA GED P R+ Sbjct: 751 QQNEKNNYSSMEEAANEVSKLKAIIESLIRREGHLIVVDDGRQAAAEGEDGRPPSVSRND 810 Query: 277 RILAVAPNYVIE 242 RILAVAPNYVI+ Sbjct: 811 RILAVAPNYVID 822 >emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera] Length = 807 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/72 (55%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Frame = -3 Query: 445 QQNQKSAYGSXXXXXXXXXXXXXXXESLIRREGHLIVLDDGREAAEGGEDLSP----RDR 278 QQN+K+ Y S ESLIRREGHLIV+DDGR+AA GED P R+ Sbjct: 736 QQNEKNNYSSMEEAANEVSKLKAIIESLIRREGHLIVVDDGRQAAAEGEDGRPPSVSRND 795 Query: 277 RILAVAPNYVIE 242 RILAVAPNYVI+ Sbjct: 796 RILAVAPNYVID 807 >ref|XP_002534164.1| minichromosome maintenance protein, putative [Ricinus communis] gi|223525759|gb|EEF28218.1| minichromosome maintenance protein, putative [Ricinus communis] Length = 713 Score = 64.3 bits (155), Expect = 1e-08 Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = -3 Query: 445 QQNQKSAYGSXXXXXXXXXXXXXXXESLIRREGHLIVLDDGRE---AAEGGEDLSPRDRR 275 QQNQK++Y S ESLIRREG+LIV+DDGR+ EG RD R Sbjct: 643 QQNQKNSYSSVEEAKNEATKVKAIIESLIRREGYLIVVDDGRQPDAEGEGARQSVSRDNR 702 Query: 274 ILAVAPNYVIE 242 ILAVAPNYV+E Sbjct: 703 ILAVAPNYVVE 713 >ref|XP_003534851.1| PREDICTED: DNA replication licensing factor MCM6 [Glycine max] Length = 863 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Frame = -3 Query: 445 QQNQKSAYGSXXXXXXXXXXXXXXXESLIRREGHLIVLDDGREAAEGGEDL-SPRDRRIL 269 QQN+++ Y S ESLIRREGHLIV+DDG+ AA E +PR+ RIL Sbjct: 795 QQNERNNYSSMEEVQAEISKIKAIIESLIRREGHLIVVDDGQAAAAAAEPPGAPRNYRIL 854 Query: 268 AVAPNYVIE 242 AVAPNYVI+ Sbjct: 855 AVAPNYVID 863