BLASTX nr result

ID: Coptis21_contig00020530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020530
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620...   179   6e-43
emb|CBI30346.3| unnamed protein product [Vitis vinifera]              179   6e-43
emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]   179   8e-43
ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
ref|XP_002530519.1| conserved hypothetical protein [Ricinus comm...   175   1e-41

>ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 693

 Score =  179 bits (455), Expect = 6e-43
 Identities = 111/202 (54%), Positives = 135/202 (66%), Gaps = 3/202 (1%)
 Frame = +3

Query: 297 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXXLVQPNYKLKRALLISKRGGSSTPVPRW 476
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 477 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 647
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 648 KRVKKDRRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 827
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 828 RKIGGIDSISNASLMEIETRSR 893
             +G +DS S+ASLMEIE RSR
Sbjct: 171 HNVGVMDSFSSASLMEIEIRSR 192


>emb|CBI30346.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  179 bits (455), Expect = 6e-43
 Identities = 111/202 (54%), Positives = 135/202 (66%), Gaps = 3/202 (1%)
 Frame = +3

Query: 297 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXXLVQPNYKLKRALLISKRGGSSTPVPRW 476
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 477 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 647
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 648 KRVKKDRRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 827
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 828 RKIGGIDSISNASLMEIETRSR 893
             +G +DS S+ASLMEIE RSR
Sbjct: 171 HNVGVMDSFSSASLMEIEIRSR 192


>emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]
          Length = 577

 Score =  179 bits (454), Expect = 8e-43
 Identities = 111/202 (54%), Positives = 135/202 (66%), Gaps = 3/202 (1%)
 Frame = +3

Query: 297 MPRHHRNSLENLINGKCKIRKRGCXXXXXXXXXLVQPNYKLKRALLISKRGGSSTPVPRW 476
           MPR + + ++ LI GK  IRKRGC         L +  Y+ KRA+L+ KRGGSSTPVP W
Sbjct: 1   MPRQN-HGIQGLIPGK--IRKRGCSSSSSTSSVLQK--YRFKRAILVGKRGGSSTPVPTW 55

Query: 477 R-MSSKSPASVFKVPESPNHHPLMYNGK--QGPVSARKLAASLWEMNEMNSPRFKDNSGL 647
           R M+S+SPAS  +  ESP     M  GK  Q PVSARKLAA+LWEMNEM SPR  D    
Sbjct: 56  RLMNSRSPASAMRAMESPRS---MGGGKAKQAPVSARKLAATLWEMNEMPSPRADDEKRS 112

Query: 648 KRVKKDRRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKVRVPG 827
           KR  + R R VARS+ SG LP HLSDPSHSPVSER++RSG   S+  + S  SQ++R+  
Sbjct: 113 KREVRGRER-VARSLHSGSLPPHLSDPSHSPVSERIDRSGT-SSYRRKTSSISQRLRLAD 170

Query: 828 RKIGGIDSISNASLMEIETRSR 893
             +G +DS S+ASLMEIE RSR
Sbjct: 171 HNVGVMDSXSSASLMEIEIRSR 192


>ref|XP_002309409.1| predicted protein [Populus trichocarpa] gi|222855385|gb|EEE92932.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  179 bits (453), Expect = 1e-42
 Identities = 108/206 (52%), Positives = 136/206 (66%), Gaps = 7/206 (3%)
 Frame = +3

Query: 297 MPRHHRNS-LENLINGKCKIRKRGCXXXXXXXXXLVQPNYKLKRALLISKRGGSSTPVPR 473
           MPR   ++ +E L+ GK  IRKR C         ++Q NY+ KRA+L+ KRGGSSTPVP 
Sbjct: 1   MPRQKGSATMEELLPGK--IRKRVCSSSASSSSSIIQ-NYRFKRAILVGKRGGSSTPVPT 57

Query: 474 WR-MSSKSPASVFKVPESPNHHPLMYNGK----QGPVSARKLAASLWEMNEMNSPRFKDN 638
           W+ M  ++P+S  +  ES    P   NGK    Q PVSARKLAA+LWEMNEM SP+ K+ 
Sbjct: 58  WKLMGKRTPSSTLRALESS---PKSLNGKAKQQQAPVSARKLAATLWEMNEMPSPQMKEE 114

Query: 639 S-GLKRVKKDRRRSVARSVQSGYLPQHLSDPSHSPVSERMERSGIGGSHYGRNSMYSQKV 815
               +R++K+ R    R V SG LP HLSDPSHSPVSER++RSG G  H  R S  SQK+
Sbjct: 115 IVEERRLRKEGRGRERRPVHSGSLPPHLSDPSHSPVSERIDRSGTGSCH-RRTSSISQKL 173

Query: 816 RVPGRKIGGIDSISNASLMEIETRSR 893
           R+  + IG  DS+SNASLMEIETRS+
Sbjct: 174 RLMDQSIGAFDSVSNASLMEIETRSQ 199


>ref|XP_002530519.1| conserved hypothetical protein [Ricinus communis]
           gi|223529923|gb|EEF31851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 680

 Score =  175 bits (443), Expect = 1e-41
 Identities = 106/220 (48%), Positives = 139/220 (63%), Gaps = 21/220 (9%)
 Frame = +3

Query: 297 MPRHH--RNSLENLINGKCKIRKRGCXXXXXXXXXLVQPNYKLKRALLISKRGGSSTPVP 470
           MPR +  R S+E L+ GK  IRKRGC         ++Q NY+ KRA+L+  RGGS+TPVP
Sbjct: 1   MPRQNQSRASVEELLPGK--IRKRGCSSSASSSSSIIQ-NYRFKRAILVGNRGGSTTPVP 57

Query: 471 RWRM--SSKSPASVFKVPESPNHHPLMYNG-----------KQGPVSARKLAASLWEMNE 611
            WR+  ++++P+S  +  +SP +      G           +  PVSARKLAA+LWE+NE
Sbjct: 58  TWRLMGTTRTPSSALRARDSPKYAASQNGGIVKGKLMLQQQQAAPVSARKLAATLWELNE 117

Query: 612 MNSPRFKDNSG-----LKRVKKDRRRS-VARSVQSGYLPQHLSDPSHSPVSERMERSGIG 773
           M SP+ K+  G     L+R  K R R+  ARSV SG LP HLSDPSHSPVSERM+RSG G
Sbjct: 118 MPSPKMKEVVGSEERRLRREGKGRERAGAARSVHSGSLPPHLSDPSHSPVSERMDRSGTG 177

Query: 774 GSHYGRNSMYSQKVRVPGRKIGGIDSISNASLMEIETRSR 893
                R+S  SQ++R+    +G  D+ISNASL+EIET SR
Sbjct: 178 SRR--RSSSISQRLRLTDYNVGAFDAISNASLLEIETSSR 215


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