BLASTX nr result

ID: Coptis21_contig00020525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020525
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599164.1| F-box protein [Medicago truncatula] gi|35548...    55   6e-06

>ref|XP_003599164.1| F-box protein [Medicago truncatula] gi|355488212|gb|AES69415.1|
           F-box protein [Medicago truncatula]
          Length = 752

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
 Frame = +3

Query: 90  MARRDWSELPRDILTKIAEDCIETHLQTIQFRAVCNSWRXXXXXXXXXXXXXXXXXXTQL 269
           MA  DWSELP+D+L  I++  ++  L  I+FR+VC++W                      
Sbjct: 1   MADADWSELPKDLLNLISQR-LDNELDLIRFRSVCSNWHSSSIPNHHNILPFKFPLLKFS 59

Query: 270 FNY-----------KTGFCELFENTIYTIRPKQLQPESCSKLLLVQV 377
             Y            T FC LF+N I+ I+PKQ Q E   +  L+++
Sbjct: 60  NTYSIDIDSINNKDNTSFCYLFKNIIFLIKPKQQQQEQTLRPWLIRI 106


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