BLASTX nr result

ID: Coptis21_contig00020523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020523
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313093.1| predicted protein [Populus trichocarpa] gi|2...   218   6e-55
ref|XP_002284980.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   218   6e-55
ref|XP_002521846.1| peptidyl-prolyl cis-trans isomerase d, ppid,...   217   8e-55
ref|XP_003524582.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   216   2e-54
ref|NP_001057148.1| Os06g0216800 [Oryza sativa Japonica Group] g...   214   5e-54

>ref|XP_002313093.1| predicted protein [Populus trichocarpa] gi|222849501|gb|EEE87048.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  218 bits (554), Expect = 6e-55
 Identities = 108/142 (76%), Positives = 116/142 (81%)
 Frame = -2

Query: 426 RCYLDISIGGELEGRIVIELFSDIVPKTAENFRALCTGEKGIXXXXXXXXXXXXXXXXXX 247
           RC+LDISIGGELEGRIVIEL++D+VPKTAENFRALCTGEKG+                  
Sbjct: 5   RCFLDISIGGELEGRIVIELYNDVVPKTAENFRALCTGEKGVGPNTGVPLHYKGC----- 59

Query: 246 XXXXXCFHRVIKGFMIQGGDISARNGTGGESIYGLKFEDENFELTHEKKGMLSMANSGPN 67
                CFHR IKGFM+QGGDISA +GTGGESIYGLKFEDENFEL HE+KGMLSMANSGPN
Sbjct: 60  -----CFHRAIKGFMVQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANSGPN 114

Query: 66  TNGSQFFITTTRTSHLDGKHVV 1
           TNGSQFFITTTRTSHLDGKHVV
Sbjct: 115 TNGSQFFITTTRTSHLDGKHVV 136


>ref|XP_002284980.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 [Vitis
           vinifera] gi|297741330|emb|CBI32461.3| unnamed protein
           product [Vitis vinifera]
          Length = 361

 Score =  218 bits (554), Expect = 6e-55
 Identities = 109/146 (74%), Positives = 117/146 (80%)
 Frame = -2

Query: 438 VNNPRCYLDISIGGELEGRIVIELFSDIVPKTAENFRALCTGEKGIXXXXXXXXXXXXXX 259
           +  PRCYLDISIG ELEGR+V+EL++DIVP+TAENFRALCTGEKGI              
Sbjct: 1   MGRPRCYLDISIGEELEGRVVVELYNDIVPRTAENFRALCTGEKGIGPNTGVPLHYKGV- 59

Query: 258 XXXXXXXXXCFHRVIKGFMIQGGDISARNGTGGESIYGLKFEDENFELTHEKKGMLSMAN 79
                    CFHRVI+GFMIQGGDISA NGTGGESIYGLKFEDENFEL HE+KGMLSMAN
Sbjct: 60  ---------CFHRVIRGFMIQGGDISAGNGTGGESIYGLKFEDENFELKHERKGMLSMAN 110

Query: 78  SGPNTNGSQFFITTTRTSHLDGKHVV 1
           SG NTNGSQFFITTTRTSHLDGKHVV
Sbjct: 111 SGANTNGSQFFITTTRTSHLDGKHVV 136


>ref|XP_002521846.1| peptidyl-prolyl cis-trans isomerase d, ppid, putative [Ricinus
           communis] gi|223538884|gb|EEF40482.1| peptidyl-prolyl
           cis-trans isomerase d, ppid, putative [Ricinus communis]
          Length = 361

 Score =  217 bits (553), Expect = 8e-55
 Identities = 108/146 (73%), Positives = 118/146 (80%)
 Frame = -2

Query: 438 VNNPRCYLDISIGGELEGRIVIELFSDIVPKTAENFRALCTGEKGIXXXXXXXXXXXXXX 259
           +  PRC+LDISIGGELEGRIVIEL++D+VPKTAENFRALCTGEKGI              
Sbjct: 1   MGRPRCFLDISIGGELEGRIVIELYNDVVPKTAENFRALCTGEKGIGPNTGVPLHYKGCP 60

Query: 258 XXXXXXXXXCFHRVIKGFMIQGGDISARNGTGGESIYGLKFEDENFELTHEKKGMLSMAN 79
                     FHR+IKGFM+QGGDISA +GTGGESIYGLKFEDENFEL HE+KGMLSMAN
Sbjct: 61  ----------FHRIIKGFMVQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMAN 110

Query: 78  SGPNTNGSQFFITTTRTSHLDGKHVV 1
           +GPNTNGSQFFITTTRTSHLDGKHVV
Sbjct: 111 AGPNTNGSQFFITTTRTSHLDGKHVV 136


>ref|XP_003524582.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40-like [Glycine
           max]
          Length = 360

 Score =  216 bits (550), Expect = 2e-54
 Identities = 107/144 (74%), Positives = 115/144 (79%)
 Frame = -2

Query: 432 NPRCYLDISIGGELEGRIVIELFSDIVPKTAENFRALCTGEKGIXXXXXXXXXXXXXXXX 253
           NPRC+LD+SIGGELEGRIV+ELF D+VPKTAENFRALCTGEKGI                
Sbjct: 3   NPRCFLDVSIGGELEGRIVVELFHDVVPKTAENFRALCTGEKGIGPNTGVPLHYKGV--- 59

Query: 252 XXXXXXXCFHRVIKGFMIQGGDISARNGTGGESIYGLKFEDENFELTHEKKGMLSMANSG 73
                  CFHRVIKGFMIQGGDISA +GTGGESIYG KFEDEN E+ HE+KGMLSMAN+G
Sbjct: 60  -------CFHRVIKGFMIQGGDISAGDGTGGESIYGAKFEDENLEVKHERKGMLSMANAG 112

Query: 72  PNTNGSQFFITTTRTSHLDGKHVV 1
           PNTNGSQFFITTTRT HLDGKHVV
Sbjct: 113 PNTNGSQFFITTTRTPHLDGKHVV 136


>ref|NP_001057148.1| Os06g0216800 [Oryza sativa Japonica Group]
           gi|51091143|dbj|BAD35839.1| putative cyclophilin-40
           [Oryza sativa Japonica Group]
           gi|113595188|dbj|BAF19062.1| Os06g0216800 [Oryza sativa
           Japonica Group] gi|215695570|dbj|BAG90761.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 396

 Score =  214 bits (546), Expect = 5e-54
 Identities = 104/146 (71%), Positives = 117/146 (80%)
 Frame = -2

Query: 438 VNNPRCYLDISIGGELEGRIVIELFSDIVPKTAENFRALCTGEKGIXXXXXXXXXXXXXX 259
           V NPRC++D+SIGGE+EGRIVIEL++ +VP+TAENFRALCTGEKG+              
Sbjct: 23  VKNPRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLHYKGS- 81

Query: 258 XXXXXXXXXCFHRVIKGFMIQGGDISARNGTGGESIYGLKFEDENFELTHEKKGMLSMAN 79
                    CFHRVIKGFM+QGGDI+A +GTGGESIYGLKFEDENF L HE+KGMLSMAN
Sbjct: 82  ---------CFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMAN 132

Query: 78  SGPNTNGSQFFITTTRTSHLDGKHVV 1
           SGPNTNGSQFFITTTRT HLDGKHVV
Sbjct: 133 SGPNTNGSQFFITTTRTPHLDGKHVV 158


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