BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020499
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    84   1e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    84   1e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    67   1e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    67   1e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = -3

Query: 376 RALFLGDNSSICLSPSDFPGCKTNCIYFTDDYFE-VHDVAGPDVFYDTGVFSLEDGSIER 200
           RALFLG+N S+ LS  DFPGCK NCIY+TDDY E  +D  G +   D G+F+LEDGSIE 
Sbjct: 311 RALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE--QDLGIFNLEDGSIEP 368

Query: 199 HCPIQTNMKFPPPIWIEP 146
                  +++PPP+W+ P
Sbjct: 369 LPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = -3

Query: 376 RALFLGDNSSICLSPSDFPGCKTNCIYFTDDYFE-VHDVAGPDVFYDTGVFSLEDGSIER 200
           RALFLG+N S+ LS  DFPGCK NCIY+TDDY E  +D  G +   D G+F+LEDGSIE 
Sbjct: 311 RALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE--QDLGIFNLEDGSIEP 368

Query: 199 HCPIQTNMKFPPPIWIEP 146
                  +++PPP+W+ P
Sbjct: 369 LPCSHFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = -3

Query: 370 LFLGDNSSICLSPSDFPGCKTNCIYFTDDYFEVHDVAGPDVFYDTGVFSLEDGSIERHCP 191
           LF+G+NSS+ LS S   GC  +CIY+TDDY   ++  G    +D G+F L DGSIE   P
Sbjct: 313 LFIGENSSLALSASGLSGCMGDCIYYTDDY-SANNYDGHIGEHDLGIFKLSDGSIE---P 368

Query: 190 I-------QTNMKFPPPIWIEP 146
           +        + +++PPP+WI P
Sbjct: 369 LPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
 Frame = -3

Query: 376 RALFLGDNSSICLSPSDFPGCKTNCIYFTDDYFEVH--DVAGPDVFYDTGVFSLEDGSIE 203
           R LF+G NSS+    SDF GC  +CIYFTDDY E +  D  G    +D GVF L D SIE
Sbjct: 311 RVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGK---HDLGVFRLRDKSIE 367

Query: 202 RHCPIQTN----MKFPPPIWIEP 146
                  N    +++P PIW+ P
Sbjct: 368 PLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
 Frame = -3

Query: 376 RALFLGDNSSICLSPSDFPGCKTNCIYFTDDYFEVHDVAGPDVFYDTGVFSLEDGSIERH 197
           +ALF+G+NSS+ LS +DF GC  NCIY+TDDY +  +  G    +D G+F L D +IE  
Sbjct: 316 KALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDA-NYDGHFGDHDLGIFKLCDETIEPL 374

Query: 196 CPIQTNMKFP----PPIWIEP 146
                N   P    PP+W+ P
Sbjct: 375 PCYPRNFTSPLQWSPPLWVSP 395