BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020496
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   121   6e-26
emb|CBI16556.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...    89   4e-16
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]    88   7e-16
emb|CBI29938.3| unnamed protein product [Vitis vinifera]               71   9e-11

>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  121 bits (304), Expect = 6e-26
 Identities = 57/132 (43%), Positives = 85/132 (64%), Gaps = 2/132 (1%)
 Frame = -1

Query: 406 SGETPLPQNVQSFPVLPGLSVPRVDFPVTPYQQQYFLNAQSPIPYVQQQQISQSHIPWQH 227
           S   PL   VQ F  L  ++VP +DFP+   Q+QYF + QS +P +  QQ +Q HI W++
Sbjct: 180 SSALPLAHGVQGFQFLSNVAVPGIDFPLMSDQRQYFADMQSVLPCIHAQQFNQPHISWRN 239

Query: 226 MEEEQYFRMQQQYLYMQQFRSQVPEARH--HENVNMTTGPITGNPRQTYFKVPTPHQVRQ 53
           +EEEQ++RM QQYLY+QQ  +Q  EA+H    N N+ T  +  + RQ YF+VP  HQ++Q
Sbjct: 240 IEEEQFYRMHQQYLYLQQLHNQRLEAQHPMQANGNVATKLMNRHVRQPYFEVPVSHQLQQ 299

Query: 52  TNEDPYWNNASI 17
            N++  WN+ ++
Sbjct: 300 PNQEQVWNDYAV 311


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/172 (29%), Positives = 80/172 (46%)
 Frame = -1

Query: 532 QESTKFSELDIQEPKKQKYWSCPPVGSFSAVLGEQRHCLPVYSGETPLPQNVQSFPVLPG 353
           QES+   +L++ E KKQ++ + PP+ +FS                 PLP  V+ FP  P 
Sbjct: 177 QESSNLLKLNVPELKKQQFGNYPPIENFS--------------NTEPLPHGVRGFPFFPN 222

Query: 352 LSVPRVDFPVTPYQQQYFLNAQSPIPYVQQQQISQSHIPWQHMEEEQYFRMQQQYLYMQQ 173
           + VP   FP                 Y+  QQ+ Q    W H+E+E Y ++ QQY Y  Q
Sbjct: 223 VPVPGAGFPA----------------YLHPQQLGQHKFDWMHVEKEHYHKLHQQYRYQVQ 266

Query: 172 FRSQVPEARHHENVNMTTGPITGNPRQTYFKVPTPHQVRQTNEDPYWNNASI 17
              +  +     N N+ T  ++   RQ YF+  TPHQ  +++++ +WN   I
Sbjct: 267 NMGRGAQHPIQANGNVATRLVSQEMRQPYFE--TPHQFEKSHQESFWNKYRI 316


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/172 (29%), Positives = 80/172 (46%)
 Frame = -1

Query: 532 QESTKFSELDIQEPKKQKYWSCPPVGSFSAVLGEQRHCLPVYSGETPLPQNVQSFPVLPG 353
           QES+   +L++ E KKQ++ + PP+ +FS                 PLP  V+ FP  P 
Sbjct: 136 QESSNLLKLNVPELKKQQFGNYPPIENFS--------------NTEPLPHGVRGFPFFPN 181

Query: 352 LSVPRVDFPVTPYQQQYFLNAQSPIPYVQQQQISQSHIPWQHMEEEQYFRMQQQYLYMQQ 173
           + VP   FP                 Y+  QQ+ Q    W H+E+E Y ++ QQY Y  Q
Sbjct: 182 VPVPGAGFPA----------------YLHPQQLGQHKFDWMHVEKEHYHKLHQQYRYQVQ 225

Query: 172 FRSQVPEARHHENVNMTTGPITGNPRQTYFKVPTPHQVRQTNEDPYWNNASI 17
              +  +     N N+ T  ++   RQ YF+  TPHQ  +++++ +WN   I
Sbjct: 226 NMGRGAQHPIQANGNVATRLVSQEMRQPYFE--TPHQFEKSHQESFWNKYRI 275


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 51/172 (29%), Positives = 79/172 (45%)
 Frame = -1

Query: 532 QESTKFSELDIQEPKKQKYWSCPPVGSFSAVLGEQRHCLPVYSGETPLPQNVQSFPVLPG 353
           QES+   +L++ E KKQ++ + PP+  FS                 PLP  V+ FP  P 
Sbjct: 177 QESSNLLKLNVPELKKQQFGNYPPIEXFS--------------NTEPLPHGVRGFPFFPN 222

Query: 352 LSVPRVDFPVTPYQQQYFLNAQSPIPYVQQQQISQSHIPWQHMEEEQYFRMQQQYLYMQQ 173
           + VP   FP                 Y+  QQ+ Q    W H+E+E Y ++ QQY Y  Q
Sbjct: 223 VPVPGAGFPA----------------YLHPQQLGQHKFDWMHVEKEHYHKLHQQYRYQVQ 266

Query: 172 FRSQVPEARHHENVNMTTGPITGNPRQTYFKVPTPHQVRQTNEDPYWNNASI 17
              +  +     N N+ T  ++   RQ YF+  TPHQ  +++++ +WN   I
Sbjct: 267 NMGRGAQHPIQANGNVATRLVSQEMRQPYFE--TPHQFEKSHQESFWNKYRI 316


>emb|CBI29938.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -1

Query: 364 VLPGLSVPRVDFPVTPYQQQYFLNAQSPIPYVQQQQISQSHIPWQHMEEEQYFRMQQQYL 185
           VL  +S P    P  P  Q YF + QSP+  +Q Q+ ++SHIPW H EEE+Y  M ++YL
Sbjct: 120 VLLTVSSPGTKVPDVPCSQSYFSSLQSPVLGMQSQEFTESHIPWLHAEEERYSIMHKKYL 179

Query: 184 YMQQFRSQVPEARH--HENVNMTTGPITGNPRQTYFKVPTPHQVRQTNEDPYWNNASI 17
           +    ++Q  EAR+    + N      T N  ++Y   P  +Q    +E+ + ++ +I
Sbjct: 180 HWHDLQNQRSEARNLIQASENAANVIRTWNIEKSYVNNPISYQYENFSEESFQSDGAI 237