BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020492
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631913.1| PREDICTED: photosystem I reaction center sub...   219   4e-55
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   219   5e-55
gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana ...   216   2e-54
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   213   2e-53
ref|XP_002526638.1| Photosystem I reaction center subunit N, chl...   213   3e-53

>ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
           [Vitis vinifera]
          Length = 173

 Score =  219 bits (558), Expect = 4e-55
 Identities = 116/173 (67%), Positives = 128/173 (73%), Gaps = 6/173 (3%)
 Frame = +2

Query: 53  MAAVNSSVLACNYAISGAS--DLSFKHASTASVALPV--GTKLPMIKAQQARVSEGK--G 214
           MA+VNSSVLACNYAISGA   +L+ K  S  S A P   G KLP I+AQQARVS+ K  G
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 215 SDDGRRXXXXXXXXXXXXXXXXXXXXXXXXFDEYLEKSKANKELNDKKRLATSGANFARA 394
           + +GRR                         D+YLEKSKANKELNDKKRLATSGANFARA
Sbjct: 61  AGEGRRAALVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARA 120

Query: 395 YTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 553
           YTVQFGTCKFPENFTGCQDLAK+KKVPF+SEDL LECEG+DK+KCGSNVFWKW
Sbjct: 121 YTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173


>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  219 bits (557), Expect = 5e-55
 Identities = 117/172 (68%), Positives = 130/172 (75%), Gaps = 5/172 (2%)
 Frame = +2

Query: 53  MAAVNSSVLACNYAISG--ASDLSFKHASTASVALPV--GTKLPMIKAQQARV-SEGKGS 217
           MAA+NSSVLACNYAISG  +S+L+ K  S  +VA PV  G KLP+I+AQQAR  S+   +
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARADSKEMKA 60

Query: 218 DDGRRXXXXXXXXXXXXXXXXXXXXXXXXFDEYLEKSKANKELNDKKRLATSGANFARAY 397
            +GRR                         ++YLEKSKANKELNDKKRLATSGANFARAY
Sbjct: 61  SEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFARAY 120

Query: 398 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 553
           TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDK+KCGSNVFWKW
Sbjct: 121 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
          Length = 168

 Score =  216 bits (551), Expect = 2e-54
 Identities = 115/171 (67%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
 Frame = +2

Query: 53  MAAVNSSVLACNYAISG--ASDLSFKHASTASVALPVGTKLPMIKAQQARV--SEGKGSD 220
           MAA+NSSVLAC+YA+SG  AS+L+ KHAS AS ++    K P+IKAQQ++V  SE   + 
Sbjct: 1   MAAMNSSVLACSYAVSGIGASELTSKHASIASQSVQ---KWPVIKAQQSKVLDSEANKNQ 57

Query: 221 DGRRXXXXXXXXXXXXXXXXXXXXXXXXFDEYLEKSKANKELNDKKRLATSGANFARAYT 400
            GRR                         D+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 58  AGRRIALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYT 117

Query: 401 VQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 553
           VQFGTCKFPENFTGCQDLAKQKKVPFIS+DLALECEGKDK+KCGSNVFWKW
Sbjct: 118 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score =  213 bits (543), Expect = 2e-53
 Identities = 117/173 (67%), Positives = 126/173 (72%), Gaps = 6/173 (3%)
 Frame = +2

Query: 53  MAAVNSSVLACNYAISGASDLSFKHASTASVALP--VGTKLPMIKAQQARVSEGKGS--D 220
           MAA+NSSVLAC+YAISG S+L+ K  S  S A P   G KLP+IKAQQ R+ E K S   
Sbjct: 1   MAAMNSSVLACSYAISG-SELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESRAS 59

Query: 221 DGRRXXXXXXXXXXXXXXXXXXXXXXXX--FDEYLEKSKANKELNDKKRLATSGANFARA 394
           DGRR                           +EYLEKSKANKELNDKKRLATSGANFARA
Sbjct: 60  DGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 119

Query: 395 YTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 553
           YTVQFGTCKFPENFTGCQDLAKQKKVPFI+EDL LECEGKDK+KCGSNVFWKW
Sbjct: 120 YTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
           putative [Ricinus communis] gi|223534030|gb|EEF35750.1|
           Photosystem I reaction center subunit N, chloroplast
           precursor, putative [Ricinus communis]
          Length = 169

 Score =  213 bits (542), Expect = 3e-53
 Identities = 117/172 (68%), Positives = 128/172 (74%), Gaps = 5/172 (2%)
 Frame = +2

Query: 53  MAAVNSSVLACNYAISG--ASDLSFKHASTASVALPV--GTKLPMIKAQQAR-VSEGKGS 217
           MAA+NSSVLACNYAISG  +S+LS K AS  S   P   G KLP+I+AQ+A+  S+ K  
Sbjct: 1   MAAMNSSVLACNYAISGTASSELS-KLASVPSAVFPTVSGPKLPVIRAQRAKPASDSKA- 58

Query: 218 DDGRRXXXXXXXXXXXXXXXXXXXXXXXXFDEYLEKSKANKELNDKKRLATSGANFARAY 397
            DGRR                         +EYLEKSKANKELNDKKRLATSGANFARAY
Sbjct: 59  -DGRRAAMLCLAATLFTTAAAVSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAY 117

Query: 398 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 553
           TVQFGTCKFPENFTGCQDLAKQKKVPFIS+DLALECEGKDK+KCGSNVFWKW
Sbjct: 118 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 169