BLASTX nr result

ID: Coptis21_contig00020491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020491
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife...   174   5e-42
ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycin...   168   5e-40
gb|AFK47180.1| unknown [Lotus japonicus]                              167   8e-40
dbj|BAJ88935.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   5e-39
dbj|BAJ88385.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   5e-39

>ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297735541|emb|CBI18035.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/108 (75%), Positives = 96/108 (88%)
 Frame = -3

Query: 325 AKPHFLPIRTSPKMPSRSRYPRIFAFTSNDIKVGSNVEVDGAPWRVIEFLHVKPGKGAAF 146
           +K   LP+R +P  P RSR+ +I AFTSNDIKVGS++EVDGAPW+V+EFLHVKPGKGAAF
Sbjct: 28  SKLSVLPMRCAPPRPYRSRFSKILAFTSNDIKVGSSIEVDGAPWKVLEFLHVKPGKGAAF 87

Query: 145 VRTKMRNYVTGNTVEKTFRAGSTINEADILKETKQYTYKDGDQFVFMD 2
           VRTKMRNYVTGNTV+KTFRAG +I+EA++ KETKQYTYKDG QFVFMD
Sbjct: 88  VRTKMRNYVTGNTVDKTFRAGCSIDEANVYKETKQYTYKDGAQFVFMD 135


>ref|NP_001236791.1| uncharacterized protein LOC100306051 [Glycine max]
           gi|255627395|gb|ACU14042.1| unknown [Glycine max]
          Length = 237

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/106 (75%), Positives = 93/106 (87%)
 Frame = -3

Query: 319 PHFLPIRTSPKMPSRSRYPRIFAFTSNDIKVGSNVEVDGAPWRVIEFLHVKPGKGAAFVR 140
           P  L +RT P   S+ R+ RI+A TSNDIKVG+N+EVDGAPWRV+EFLHVKPGKGAAFVR
Sbjct: 32  PFLLSMRT-PSSSSKPRFLRIYALTSNDIKVGTNLEVDGAPWRVLEFLHVKPGKGAAFVR 90

Query: 139 TKMRNYVTGNTVEKTFRAGSTINEADILKETKQYTYKDGDQFVFMD 2
           TKM+NY+TGNTVEKTFRAGS+I +AD+ KETKQ+TYKDG QFVFMD
Sbjct: 91  TKMKNYITGNTVEKTFRAGSSIEQADVFKETKQFTYKDGVQFVFMD 136


>gb|AFK47180.1| unknown [Lotus japonicus]
          Length = 229

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/108 (74%), Positives = 93/108 (86%)
 Frame = -3

Query: 325 AKPHFLPIRTSPKMPSRSRYPRIFAFTSNDIKVGSNVEVDGAPWRVIEFLHVKPGKGAAF 146
           + P  LP+R     P   R+ +I+A TSNDIKVGSNVEVDGAPWRV+EFLHVKPGKGAAF
Sbjct: 24  SNPSLLPMRNPSSKP---RFFKIYALTSNDIKVGSNVEVDGAPWRVLEFLHVKPGKGAAF 80

Query: 145 VRTKMRNYVTGNTVEKTFRAGSTINEADILKETKQYTYKDGDQFVFMD 2
           VRTK++NY+TGNTV+KTFRAGS+I +ADILKETKQ+TYKDG QFVFMD
Sbjct: 81  VRTKLKNYLTGNTVDKTFRAGSSIEQADILKETKQFTYKDGSQFVFMD 128


>dbj|BAJ88935.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/94 (80%), Positives = 86/94 (91%)
 Frame = -3

Query: 283 PSRSRYPRIFAFTSNDIKVGSNVEVDGAPWRVIEFLHVKPGKGAAFVRTKMRNYVTGNTV 104
           P RSR+ R++A +SNDIKVG N+EVDGAPW+++EFLHVKPGKGAAFVRTKMRNY+TGNTV
Sbjct: 43  PLRSRFTRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTV 102

Query: 103 EKTFRAGSTINEADILKETKQYTYKDGDQFVFMD 2
           EKTFRAGSTI EA I KETKQ+TYKDG QFVFMD
Sbjct: 103 EKTFRAGSTIQEASISKETKQFTYKDGSQFVFMD 136


>dbj|BAJ88385.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/94 (80%), Positives = 86/94 (91%)
 Frame = -3

Query: 283 PSRSRYPRIFAFTSNDIKVGSNVEVDGAPWRVIEFLHVKPGKGAAFVRTKMRNYVTGNTV 104
           P RSR+ R++A +SNDIKVG N+EVDGAPW+++EFLHVKPGKGAAFVRTKMRNY+TGNTV
Sbjct: 43  PLRSRFTRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTV 102

Query: 103 EKTFRAGSTINEADILKETKQYTYKDGDQFVFMD 2
           EKTFRAGSTI EA I KETKQ+TYKDG QFVFMD
Sbjct: 103 EKTFRAGSTIQEASISKETKQFTYKDGSQFVFMD 136


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