BLASTX nr result

ID: Coptis21_contig00020484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020484
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane prot...   232   1e-58
ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane prot...   223   6e-56
ref|XP_002300443.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|NP_175758.2| peptidase-S24/S26 domain-containing protein [Ar...   214   2e-53
ref|XP_002891755.1| signal peptidase I family protein [Arabidops...   214   2e-53

>ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane protease subunit 1 [Vitis
           vinifera] gi|302142795|emb|CBI20090.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  232 bits (591), Expect = 1e-58
 Identities = 101/161 (62%), Positives = 135/161 (83%)
 Frame = -2

Query: 817 LQQWKSLAKEAVDQTMLVAKFFCFLHVTDKYVISSILVQGPSMYPTLNHTGDVILVEKIS 638
           L QW++LA+EA ++T ++AKF C LHVT+ Y+ +  LV GPSM PT N TGDV+LVE ++
Sbjct: 7   LSQWRTLAREAAERTAILAKFLCILHVTNTYICTPTLVYGPSMLPTFNLTGDVLLVENLT 66

Query: 637 TKLGKVGPGDIVIVRAPDNPRKTITKRVLGMEGDCVSFLVDPAHSERTKSIVVPKGHVWV 458
            ++GKV PGD+V+VR+P+NPRKT++KR+LGMEGD V+F++DP +S R +S+V+PKGHVW+
Sbjct: 67  VRMGKVRPGDVVLVRSPENPRKTVSKRILGMEGDRVTFMIDPKNSNRCQSVVIPKGHVWI 126

Query: 457 QGDNVYASVDSRYFGPVPYVLVQGKVICRIWPPHGFGSLRQ 335
           QGDN+YAS DSR FGPVPY L+QGKV  R+WP +GFGSLRQ
Sbjct: 127 QGDNIYASHDSRNFGPVPYGLIQGKVFFRVWPLNGFGSLRQ 167


>ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Cucumis sativus] gi|449483132|ref|XP_004156501.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           1-like [Cucumis sativus]
          Length = 161

 Score =  223 bits (567), Expect = 6e-56
 Identities = 99/159 (62%), Positives = 129/159 (81%)
 Frame = -2

Query: 811 QWKSLAKEAVDQTMLVAKFFCFLHVTDKYVISSILVQGPSMYPTLNHTGDVILVEKISTK 632
           QW+S+ KEA+D+T+++AKF C LHVT+ Y+ S  LV GPSM PTLN TGDV+L E +S +
Sbjct: 3   QWRSVVKEAIDRTVIIAKFLCLLHVTNNYICSPTLVYGPSMLPTLNLTGDVLLAEHVSHR 62

Query: 631 LGKVGPGDIVIVRAPDNPRKTITKRVLGMEGDCVSFLVDPAHSERTKSIVVPKGHVWVQG 452
           +G+VGPGD+V+VR+P NPRK +TKR++G+EGD V+F  DPA+S + +S VVPKGHVW+QG
Sbjct: 63  VGRVGPGDVVLVRSPRNPRKMLTKRIVGVEGDKVNFYPDPANSNQYQSAVVPKGHVWIQG 122

Query: 451 DNVYASVDSRYFGPVPYVLVQGKVICRIWPPHGFGSLRQ 335
           DNVYAS DSR+FGPVPY L++GK   R+WPP  FG L Q
Sbjct: 123 DNVYASRDSRHFGPVPYGLIEGKAFLRVWPPDCFGRLDQ 161


>ref|XP_002300443.1| predicted protein [Populus trichocarpa] gi|222847701|gb|EEE85248.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  215 bits (548), Expect = 1e-53
 Identities = 97/163 (59%), Positives = 130/163 (79%)
 Frame = -2

Query: 823 RNLQQWKSLAKEAVDQTMLVAKFFCFLHVTDKYVISSILVQGPSMYPTLNHTGDVILVEK 644
           +++  WKS+AKEA  QT LVAKF  FLH+T+ Y+IS  LV GPSM PTLN TGDV+LVE 
Sbjct: 2   KSMNAWKSIAKEAFSQTCLVAKFLGFLHLTNNYLISPTLVYGPSMLPTLNLTGDVLLVEH 61

Query: 643 ISTKLGKVGPGDIVIVRAPDNPRKTITKRVLGMEGDCVSFLVDPAHSERTKSIVVPKGHV 464
           +S +  KVGPGD+V+VR+P +P K +TKR++GMEGD ++FL DP+ ++  ++++VPKGH+
Sbjct: 62  VSHRFQKVGPGDVVLVRSPLDPTKMVTKRIVGMEGDQINFLPDPSITDICRTVMVPKGHI 121

Query: 463 WVQGDNVYASVDSRYFGPVPYVLVQGKVICRIWPPHGFGSLRQ 335
           W+QGDN+YAS DSR++GPVPY LVQGK+  R+WPP  FGS  Q
Sbjct: 122 WIQGDNMYASCDSRHYGPVPYGLVQGKLFFRVWPPSSFGSFGQ 164


>ref|NP_175758.2| peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana]
           gi|44681348|gb|AAS47614.1| At1g53530 [Arabidopsis
           thaliana] gi|45773848|gb|AAS76728.1| At1g53530
           [Arabidopsis thaliana] gi|110738199|dbj|BAF01030.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332194831|gb|AEE32952.1| peptidase-S24/S26
           domain-containing protein [Arabidopsis thaliana]
          Length = 168

 Score =  214 bits (546), Expect = 2e-53
 Identities = 94/160 (58%), Positives = 126/160 (78%)
 Frame = -2

Query: 817 LQQWKSLAKEAVDQTMLVAKFFCFLHVTDKYVISSILVQGPSMYPTLNHTGDVILVEKIS 638
           L+QW+  AKEA +   +VAKF C LHVTD+Y+IS+  V GPSM PTLN TGDVIL E +S
Sbjct: 9   LKQWRGTAKEAFENVSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVILAEHLS 68

Query: 637 TKLGKVGPGDIVIVRAPDNPRKTITKRVLGMEGDCVSFLVDPAHSERTKSIVVPKGHVWV 458
            + GK+G GD+V+VR+P +P++ +TKR+LG+EGD ++F  DP   + + S++VPKGHVW+
Sbjct: 69  HRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGHVWI 128

Query: 457 QGDNVYASVDSRYFGPVPYVLVQGKVICRIWPPHGFGSLR 338
           QGDN+YAS DSR+FGPVPY L++GK + R+WPP  FGSLR
Sbjct: 129 QGDNLYASTDSRHFGPVPYSLIEGKALLRVWPPEYFGSLR 168


>ref|XP_002891755.1| signal peptidase I family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337597|gb|EFH68014.1| signal peptidase I
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 168

 Score =  214 bits (545), Expect = 2e-53
 Identities = 93/160 (58%), Positives = 126/160 (78%)
 Frame = -2

Query: 817 LQQWKSLAKEAVDQTMLVAKFFCFLHVTDKYVISSILVQGPSMYPTLNHTGDVILVEKIS 638
           L+QW+  AKEA +   +VAKF C LHVTD+Y+IS+  V GPSM PTLN TGDVIL E +S
Sbjct: 9   LKQWRGTAKEAFENVSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVILAEHLS 68

Query: 637 TKLGKVGPGDIVIVRAPDNPRKTITKRVLGMEGDCVSFLVDPAHSERTKSIVVPKGHVWV 458
            + GK+G GD+V+VR+P +P++ +TKR+LG+EGD ++F  DP   + + S++VPKGHVW+
Sbjct: 69  HRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGHVWI 128

Query: 457 QGDNVYASVDSRYFGPVPYVLVQGKVICRIWPPHGFGSLR 338
           QGDN+YAS DSR+FGP+PY L++GK + R+WPP  FGSLR
Sbjct: 129 QGDNLYASTDSRHFGPIPYSLIEGKALLRVWPPEYFGSLR 168


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