BLASTX nr result

ID: Coptis21_contig00020483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020483
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37642.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260...    95   5e-18
ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|ACN40217.1| unknown [Picea sitchensis]                              74   2e-11
ref|XP_003612367.1| hypothetical protein MTR_5g024240 [Medicago ...    65   7e-09

>emb|CBI37642.3| unnamed protein product [Vitis vinifera]
          Length = 763

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/86 (60%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = -1

Query: 260 MGGLLHLFDFNQSA-SRKSHTAKKH-DGLEAPRNSLDFPRETIQGYDAVGENIPHSYQVM 87
           MGGL HLFDFNQS+ +RK    K+H  GLEAPRNSL+ P ET QGY AVG+++P+SYQV 
Sbjct: 1   MGGLFHLFDFNQSSMARKVLAHKRHVGGLEAPRNSLELPIETSQGYYAVGDSVPNSYQVQ 60

Query: 86  RNSSKSKNDYPSEAPMKKLIAEEISK 9
           ++ +  KN +P+EA MKKLI +E+SK
Sbjct: 61  QDWA-GKNCHPTEASMKKLINQEMSK 85


>ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260782 [Vitis vinifera]
          Length = 872

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/86 (60%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = -1

Query: 260 MGGLLHLFDFNQSA-SRKSHTAKKH-DGLEAPRNSLDFPRETIQGYDAVGENIPHSYQVM 87
           MGGL HLFDFNQS+ +RK    K+H  GLEAPRNSL+ P ET QGY AVG+++P+SYQV 
Sbjct: 1   MGGLFHLFDFNQSSMARKVLAHKRHVGGLEAPRNSLELPIETSQGYYAVGDSVPNSYQVQ 60

Query: 86  RNSSKSKNDYPSEAPMKKLIAEEISK 9
           ++ +  KN +P+EA MKKLI +E+SK
Sbjct: 61  QDWA-GKNCHPTEASMKKLINQEMSK 85


>ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|222855880|gb|EEE93427.1|
           predicted protein [Populus trichocarpa]
          Length = 898

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = -1

Query: 260 MGGLLHLFDFNQ-SASRKSHTAKKH-DGLEAPRNSLDFPRETIQGYDAVGENIPHSYQVM 87
           MGG LHLFDFNQ S +RK    K+H DGLEAPRNSL+   E+ Q   A  E+  +SY+V 
Sbjct: 1   MGGFLHLFDFNQDSMARKILAHKRHVDGLEAPRNSLELQVESSQSCCA-AEDAQYSYEVE 59

Query: 86  RNSSKSKNDYPSEAPMKKLIAEEISKE 6
            N S+ KN YP EA MK+LI EEIS++
Sbjct: 60  ENWSQ-KNCYPIEASMKRLINEEISQQ 85


>gb|ACN40217.1| unknown [Picea sitchensis]
          Length = 894

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = -1

Query: 260 MGGLLHLFDFNQSAS-RKSHTAKKH-DGLEAPRNSLDFPRETIQGYDAVGENIPHSYQVM 87
           MGGLL+LFDFNQ+ + R+  T K+H DGLEAPRNSLD   ET    +   E+IP++Y++ 
Sbjct: 21  MGGLLNLFDFNQAHNGRRLLTEKRHGDGLEAPRNSLDVSLETPPSREVKNEDIPYAYEM- 79

Query: 86  RNSSKSKNDYPSEAPMKKLIAEEISKE 6
            N   +     S  PMK LIA+E+SKE
Sbjct: 80  -NKVPTTRKKVSGMPMKTLIAQEMSKE 105


>ref|XP_003612367.1| hypothetical protein MTR_5g024240 [Medicago truncatula]
           gi|355513702|gb|AES95325.1| hypothetical protein
           MTR_5g024240 [Medicago truncatula]
          Length = 846

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = -1

Query: 260 MGGLLHLFDFNQS-ASRKSHTAKK-HDGLEAPRNSLDFPRETIQGYDAVGENIPHSYQVM 87
           MGGLLH F+FNQ   ++K H  K+ H   E  RN+LD   ET Q Y   GE +PH Y V 
Sbjct: 1   MGGLLHFFEFNQGRMAKKVHAHKRHHSDFETHRNNLDLQVETSQKYSPEGE-LPHYYHVE 59

Query: 86  RNSSKSKNDYPSEAPMKKLIAEEIS 12
              S++ N Y +   MKKLI EE+S
Sbjct: 60  EELSEN-NRYSNAGSMKKLINEELS 83