BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020472
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71500.1| hypothetical protein VITISV_007955 [Vitis vinifera]    59   3e-06
emb|CAN78853.1| hypothetical protein VITISV_039252 [Vitis vinifera]    59   4e-06
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]    59   5e-06
gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subc...    59   5e-06
gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-...    59   5e-06

>emb|CAN71500.1| hypothetical protein VITISV_007955 [Vitis vinifera]
          Length = 914

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 27/42 (64%), Positives = 37/42 (88%)
 Frame = -3

Query: 227 SNNEAEYEALIAGLRMASKLSVSLIKIFSDSQLVVKQITKDY 102
           SNNEAEYEA+++GL +A  LSVS ++I+SDSQLVV+Q+ K+Y
Sbjct: 434 SNNEAEYEAILSGLNLALALSVSKLRIYSDSQLVVRQLQKEY 475


>emb|CAN78853.1| hypothetical protein VITISV_039252 [Vitis vinifera]
          Length = 995

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 37/42 (88%)
 Frame = -3

Query: 227 SNNEAEYEALIAGLRMASKLSVSLIKIFSDSQLVVKQITKDY 102
           SNNEAEYEA+++GL +A  LSVS ++I+SDSQLVV+Q+ K+Y
Sbjct: 492 SNNEAEYEAILSGLDLALALSVSKLRIYSDSQLVVRQVQKEY 533


>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
          Length = 987

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 27/44 (61%), Positives = 37/44 (84%)
 Frame = -3

Query: 227 SNNEAEYEALIAGLRMASKLSVSLIKIFSDSQLVVKQITKDYVT 96
           SNNEAEYEA+++GL +A  LSVS +++FSDSQLVVK + ++Y T
Sbjct: 492 SNNEAEYEAILSGLDLALALSVSKLRVFSDSQLVVKHVQEEYET 535


>gb|ABF99975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = -3

Query: 236  SKQSNNEAEYEALIAGLRMASKLSVSLIKIFSDSQLVVKQITKDYVTNGPS*SHKIPQSC 57
            S+ +NN AEYE L+AG+R A+ L V  + +  DS+LV  Q+ KDY  + P  S  I +  
Sbjct: 1099 SRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELVTNQVHKDYKCSNPELSKYITE-V 1157

Query: 56   RRFGKRFQSVFFR 18
            R+ GKRF  +  R
Sbjct: 1158 RKLGKRFDGIEVR 1170


>gb|AAS01973.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1403

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = -3

Query: 236  SKQSNNEAEYEALIAGLRMASKLSVSLIKIFSDSQLVVKQITKDYVTNGPS*SHKIPQSC 57
            S+ +NN AEYE L+AG+R A+ L V  + +  DS+LV  Q+ KDY  + P  S  I +  
Sbjct: 1089 SRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELVTNQVHKDYKCSNPELSKYITE-V 1147

Query: 56   RRFGKRFQSVFFR 18
            R+ GKRF  +  R
Sbjct: 1148 RKLGKRFDGIEVR 1160