BLASTX nr result

ID: Coptis21_contig00020468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020468
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250...    68   7e-10
ref|XP_002307555.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_004169748.1| PREDICTED: uncharacterized LOC101213605 [Cuc...    62   6e-08
ref|XP_004145733.1| PREDICTED: uncharacterized protein LOC101213...    62   6e-08
ref|NP_001030892.1| uncharacterized protein [Arabidopsis thalian...    61   1e-07

>ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250429 [Vitis vinifera]
           gi|297740664|emb|CBI30846.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/89 (43%), Positives = 44/89 (49%)
 Frame = -3

Query: 267 LLHQANXXXXXXXXDTCQVGLLEKSKTAPGLSTLGHHRKCCSLHFGHVGSRQKXXXXXXX 88
           L HQ +         + Q  LLEK+   P  S    HRKCCSL   H+GSRQK       
Sbjct: 113 LCHQPDDEDDEDEESSSQEALLEKTLNLPSSSNKNSHRKCCSLRAIHIGSRQKIVILVIV 172

Query: 87  XXXXXXXXXXVLIWIGTGKNSIDSSIVAR 1
                     VLIWIG GKN IDSS+VAR
Sbjct: 173 LIFVLMVTFAVLIWIGMGKNLIDSSVVAR 201


>ref|XP_002307555.1| predicted protein [Populus trichocarpa] gi|222857004|gb|EEE94551.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/89 (40%), Positives = 43/89 (48%)
 Frame = -3

Query: 267 LLHQANXXXXXXXXDTCQVGLLEKSKTAPGLSTLGHHRKCCSLHFGHVGSRQKXXXXXXX 88
           L HQAN        ++ Q  LLE SK  PG +    +R+CCS     VGS QK       
Sbjct: 111 LCHQANEEDDDDEENSSQQPLLESSKNKPGSTNTDSYRRCCSFRGIQVGSHQKFVIAVVV 170

Query: 87  XXXXXXXXXXVLIWIGTGKNSIDSSIVAR 1
                     V+IWIG G N IDSS+VAR
Sbjct: 171 LIFFLMLSFAVVIWIGAGNNPIDSSVVAR 199


>ref|XP_004169748.1| PREDICTED: uncharacterized LOC101213605 [Cucumis sativus]
          Length = 360

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = -3

Query: 267 LLHQANXXXXXXXXDTCQVG--LLEKSKTAPGLSTLGHHRKCCSLHFGHVGSRQKXXXXX 94
           L HQAN        +   +   LLE SK  PG S +  HR+CC     H+GSRQK     
Sbjct: 116 LCHQANDEEDDDDDEENNIRQTLLENSKNKPGSSNVDGHRRCCGFPAIHLGSRQKIVIVV 175

Query: 93  XXXXXXXXXXXXVLIWIGTGKNSIDSSIVAR 1
                       +LIWIG GKN IDS+ VAR
Sbjct: 176 VMLVFLLMVAVSILIWIGAGKNPIDSTAVAR 206


>ref|XP_004145733.1| PREDICTED: uncharacterized protein LOC101213605 [Cucumis sativus]
          Length = 360

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = -3

Query: 267 LLHQANXXXXXXXXDTCQVG--LLEKSKTAPGLSTLGHHRKCCSLHFGHVGSRQKXXXXX 94
           L HQAN        +   +   LLE SK  PG S +  HR+CC     H+GSRQK     
Sbjct: 116 LCHQANDEEDDDDDEENNIRQTLLENSKNKPGSSNVDGHRRCCGFPAIHLGSRQKIVIVV 175

Query: 93  XXXXXXXXXXXXVLIWIGTGKNSIDSSIVAR 1
                       +LIWIG GKN IDS+ VAR
Sbjct: 176 VMLVFLLMVAVSILIWIGAGKNPIDSTAVAR 206


>ref|NP_001030892.1| uncharacterized protein [Arabidopsis thaliana]
           gi|222423598|dbj|BAH19768.1| AT3G59090 [Arabidopsis
           thaliana] gi|332646356|gb|AEE79877.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 361

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 39/68 (57%)
 Frame = -3

Query: 207 LLEKSKTAPGLSTLGHHRKCCSLHFGHVGSRQKXXXXXXXXXXXXXXXXXVLIWIGTGKN 28
           LLEKSK+ PG S     RKCCS H  HVG+RQK                 +LIWI +GKN
Sbjct: 135 LLEKSKSKPGSSNASDRRKCCSFHGIHVGTRQKFVVAAIILVFILMISFAILIWIASGKN 194

Query: 27  SIDSSIVA 4
            ++SS++A
Sbjct: 195 PMNSSLLA 202


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