BLASTX nr result

ID: Coptis21_contig00020467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020467
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523266.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221...    59   3e-07
ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]       59   5e-07
ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arab...    56   3e-06

>ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis]
           gi|223537479|gb|EEF39105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/73 (46%), Positives = 41/73 (56%)
 Frame = -2

Query: 221 KYRSDGVKKSIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVE 42
           K+RS G KK++KEEALD+LK M  A+ D                       LYKF TT+E
Sbjct: 125 KFRSSGAKKTMKEEALDSLKAMGSASIDAQKPPSPLQTFLGGVSAAVIALILYKFTTTIE 184

Query: 41  AGLNRQVISDNFS 3
           A LNRQ +SDNFS
Sbjct: 185 AALNRQTVSDNFS 197


>ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]
           gi|449495512|ref|XP_004159863.1| PREDICTED:
           uncharacterized LOC101221005 [Cucumis sativus]
          Length = 282

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/73 (43%), Positives = 40/73 (54%)
 Frame = -2

Query: 221 KYRSDGVKKSIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVE 42
           K+RS GVKKS+KEEA+D+LK +     +                       LYKF TT+E
Sbjct: 122 KFRSGGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKFTTTIE 181

Query: 41  AGLNRQVISDNFS 3
           A LNRQ +SDNFS
Sbjct: 182 ASLNRQTVSDNFS 194


>ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|222860437|gb|EEE97984.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/73 (45%), Positives = 40/73 (54%)
 Frame = -2

Query: 221 KYRSDGVKKSIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVE 42
           K+RS G KK++KEEALD+LK    A  D                       LYKF+TT+E
Sbjct: 58  KFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPVQAFLGAISAGVIALILYKFSTTIE 117

Query: 41  AGLNRQVISDNFS 3
           A LNRQ +SDNFS
Sbjct: 118 ASLNRQTVSDNFS 130


>gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 238

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/73 (45%), Positives = 39/73 (53%)
 Frame = -2

Query: 221 KYRSDGVKKSIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVE 42
           K+RS G KK++KEEALD+LK    A  D                       LYKF TT+E
Sbjct: 125 KFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPVQAFLGAISAGVIALILYKFTTTIE 184

Query: 41  AGLNRQVISDNFS 3
           A LNRQ +SDNFS
Sbjct: 185 ASLNRQTVSDNFS 197


>ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arabidopsis lyrata subsp.
           lyrata] gi|297330908|gb|EFH61327.1| hypothetical protein
           ARALYDRAFT_478942 [Arabidopsis lyrata subsp. lyrata]
          Length = 261

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -2

Query: 221 KYRSDGVKKSIKEEALDNLKGM-KLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTV 45
           ++RS G KKS+KEEA+DNLK +     E                        LYKF  TV
Sbjct: 117 RFRSTGAKKSLKEEAMDNLKALGSTPIEGGNSTPSAAQAFLGAIAAGVIALILYKFTVTV 176

Query: 44  EAGLNRQVISDNFS 3
           E+GLNRQ ISDNFS
Sbjct: 177 ESGLNRQTISDNFS 190


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