BLASTX nr result

ID: Coptis21_contig00020464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020464
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]    66   3e-09
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]         56   3e-06
ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis ...    56   3e-06

>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
           gi|223544035|gb|EEF45561.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1357

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
 Frame = +3

Query: 3   PIPELTPETIIRLAQXXXXXXXXXXXXXXXXXXISFLQTLSTSPNSLTEYITALVSLIT- 179
           P P LT   II LA                   IS+L+T S S  +LT+Y  +L+SLI+ 
Sbjct: 17  PPPPLTDTEIINLAYKNHLHPYILSTSSIPTL-ISYLKTRSHSSVALTDYTLSLLSLISL 75

Query: 180 --QNXXXXXXXXXXXXXYIHLFTSHIIPRDQHVTNTITLFSLHLNSIPKTNLTSLVDTIL 353
              N             Y +LF S IIPRD +   TI LF+  L  IP  +L S+ D+IL
Sbjct: 76  SPHNPSLSSLLSSLLSTYTNLFLSLIIPRDSNSLKTINLFTTLLTYIPVNDLDSIADSIL 135

Query: 354 SDIDNVLHFNDAPLLDILPQCLNIM 428
           + + +++   D  +L+I+P CL+ +
Sbjct: 136 NHLSSLVTSEDTQILEIIPGCLSCL 160


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
 Frame = +3

Query: 9   PELTPETIIRLA----QXXXXXXXXXXXXXXXXXXISFLQT--LSTSPN-SLTEYITALV 167
           P+LT + I+RLA    Q                  IS+L +   + SP+ ++ +Y  +L+
Sbjct: 18  PQLTDDDIVRLAREHPQTSASLPSFLLSSTSHPTLISYLHSRAAAASPSLAVADYTFSLL 77

Query: 168 SLIT---QNXXXXXXXXXXXXXYIHLFTSHIIPRDQHVTNTITLFSLHLNSIPKTNLTSL 338
           SLI+    +             YI LF S  IP D++   TI +F LHL   P  +L ++
Sbjct: 78  SLISLSPHSPPLSTLFSSLLLAYIKLFNSRQIPHDRNSLKTIQIFYLHLEIAPNHDLLAV 137

Query: 339 VDTILSDIDNVLHFNDAPLLDILPQCLNIM 428
            D I+ D+  +++ +DA LLD+LP+CL+++
Sbjct: 138 ADAIVFDLLQIVNQDDAQLLDLLPRCLDLI 167


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
           predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
 Frame = +3

Query: 114 QTLSTSPN-SLTEYITALVSLIT---QNXXXXXXXXXXXXXYIHLFTSHIIPRDQHVTNT 281
           +TLS SP+  + +Y  +L+SLI+                  Y +LF S  IPRD +   T
Sbjct: 54  RTLSPSPSLPICQYTLSLLSLISLSPHTPSLSSLLSFLLADYTNLFLSFQIPRDSNSLKT 113

Query: 282 ITLFSLHLNSIPKTNLTSLVDTILSDIDNVLHFNDAPLLDILPQCLNIML 431
           I  FS  LN++P  +L ++ ++I+ ++  ++ F D  +LDILP C N+M+
Sbjct: 114 IHFFSTVLNNVPIKDLEAVSESIVLNLSKLVSFEDTQMLDILPACFNLMI 163


>dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1487

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = +3

Query: 102 ISFLQTLSTSPN---SLTEYITALVSLITQNXXXXXXXXXXXXX---YIHLFTSHIIPRD 263
           +S+L++ S+SP+    ++EY+ AL+SLI+ +                Y  +F S  IP D
Sbjct: 49  LSYLKSRSSSPSPSKQVSEYVIALLSLISLSPTTPSLCSLLASLLISYTQIFNSCKIPSD 108

Query: 264 QHVTNTITLFSLHLNSIPKTNLTSLVDTILSDIDNVLHFNDAPLLDILPQCLNIM 428
                TI LF   L  +    + S+VD+ILS +  V+  ++A + D+LP C +++
Sbjct: 109 SDSLKTIQLFGTLLRYLHVKEVKSVVDSILSGVTRVITVDEAQVFDLLPVCFDLL 163


>ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis thaliana]
           gi|332008389|gb|AED95772.1| fanconi anemia group I
           protein [Arabidopsis thaliana]
          Length = 1470

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = +3

Query: 102 ISFLQTLSTSPN---SLTEYITALVSLITQNXXXXXXXXXXXXX---YIHLFTSHIIPRD 263
           +S+L++ S+SP+    ++EY+ AL+SLI+ +                Y  +F S  IP D
Sbjct: 49  LSYLKSRSSSPSPSKQVSEYVIALLSLISLSPTTPSLCSLLASLLISYTQIFNSCKIPSD 108

Query: 264 QHVTNTITLFSLHLNSIPKTNLTSLVDTILSDIDNVLHFNDAPLLDILPQCLNIM 428
                TI LF   L  +    + S+VD+ILS +  V+  ++A + D+LP C +++
Sbjct: 109 SDSLKTIQLFGTLLRYLHVKEVKSVVDSILSGVTRVITVDEAQVFDLLPVCFDLL 163


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