BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020452
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...    37   6e-06
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    37   8e-06

>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +2

Query: 2   FYKAYSHTRTKIWVVRSGIQY 64
           FYKAYSH R K WVVR G QY
Sbjct: 121 FYKAYSHLRMKNWVVRPGSQY 141



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 72  HPSLVHSEYAVIV-SEGNGNKNTCLLAWPD 158
           HPSLVHSEYAV+V SE + N N  L  W D
Sbjct: 151 HPSLVHSEYAVLVLSEEDANANGRLRVWSD 180


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score = 37.4 bits (85), Expect(2) = 8e-06
 Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 72  HPSLVHSEYAVIV-SEGNGNKNTCLLAWPD 158
           HP+LVHSEYAV+V SE N N N  L  W D
Sbjct: 151 HPALVHSEYAVLVLSEENENANGRLRVWSD 180



 Score = 37.0 bits (84), Expect(2) = 8e-06
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +2

Query: 2   FYKAYSHTRTKIWVVRSGIQY 64
           FY AYSH R K WVVRSG QY
Sbjct: 121 FYMAYSHLRIKNWVVRSGSQY 141