BLASTX nr result

ID: Coptis21_contig00020449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020449
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   147   9e-34
emb|CBI39010.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002529883.1| transcription factor, putative [Ricinus comm...   138   5e-31
ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]...   130   8e-29
ref|XP_003547562.1| PREDICTED: probable lysine-specific demethyl...   130   1e-28

>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1118

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/119 (57%), Positives = 88/119 (73%)
 Frame = +2

Query: 2   KTRVMTEQERMDCLPLPILLHAQKMEQDFDSTQERECFQCFYDLHLSASVCSCSSKRFAC 181
           KTRV  E+ER+D LP+   L  QKME+DFD   ERECF CFYDLHLSA+ C CS  +FAC
Sbjct: 520 KTRVQMEEERLDRLPIGWRL--QKMERDFDLKNERECFSCFYDLHLSAASCECSPDQFAC 577

Query: 182 LKHAKILCSCGSGQKFFLFRYSMDELNTLVEALEGNVDALKIWVPEDLKLVVTNRNDAG 358
           LKHA ++CSC   +KF L RY+MD+L TLVE+LEG +DA+++W  EDL LV  +++  G
Sbjct: 578 LKHASLICSCEPNRKFVLLRYTMDDLKTLVESLEGGLDAIEVWASEDLGLVSADKDACG 636


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/116 (58%), Positives = 87/116 (75%)
 Frame = +2

Query: 2   KTRVMTEQERMDCLPLPILLHAQKMEQDFDSTQERECFQCFYDLHLSASVCSCSSKRFAC 181
           KTRV  E+ER+D LP+   L  QKME+DFD   ERECF CFYDLHLSA+ C CS  +FAC
Sbjct: 566 KTRVQMEEERLDRLPIGWRL--QKMERDFDLKNERECFSCFYDLHLSAASCECSPDQFAC 623

Query: 182 LKHAKILCSCGSGQKFFLFRYSMDELNTLVEALEGNVDALKIWVPEDLKLVVTNRN 349
           LKHA ++CSC   +KF L RY+MD+L TLVE+LEG +DA+++W  EDL LV  +++
Sbjct: 624 LKHASLICSCEPNRKFVLLRYTMDDLKTLVESLEGGLDAIEVWASEDLGLVSADKD 679


>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
           gi|223530610|gb|EEF32486.1| transcription factor,
           putative [Ricinus communis]
          Length = 935

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/118 (55%), Positives = 85/118 (72%)
 Frame = +2

Query: 2   KTRVMTEQERMDCLPLPILLHAQKMEQDFDSTQERECFQCFYDLHLSASVCSCSSKRFAC 181
           KTRV  E+ER+  LP  + L  QKME+DFD   ERECF CFYDLHLSA+ C C  ++FAC
Sbjct: 454 KTRVQMEEERLQNLPTHLKL--QKMEKDFDLGNERECFMCFYDLHLSAASCKCCPEQFAC 511

Query: 182 LKHAKILCSCGSGQKFFLFRYSMDELNTLVEALEGNVDALKIWVPEDLKLVVTNRNDA 355
           LKHAK  CSC + + + L  Y++DELN LVEALEG++DA+K+W+ ++ +LV    N A
Sbjct: 512 LKHAKDFCSCENDESYVLVHYTVDELNRLVEALEGSLDAIKVWISKEFRLVSEADNGA 569


>ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]
           gi|222860133|gb|EEE97680.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 753

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/111 (57%), Positives = 76/111 (68%)
 Frame = +2

Query: 2   KTRVMTEQERMDCLPLPILLHAQKMEQDFDSTQERECFQCFYDLHLSASVCSCSSKRFAC 181
           KTRV  EQER+ CLP  + L  QKME+DFD   ERECF CFYDLHLSA  C CS KRFAC
Sbjct: 449 KTRVKMEQERIKCLPTNLRL--QKMEKDFDLQNERECFSCFYDLHLSAVSCKCSPKRFAC 506

Query: 182 LKHAKILCSCGSGQKFFLFRYSMDELNTLVEALEGNVDALKIWVPEDLKLV 334
           LKHA   C+C    ++ L RY++DELNTLV+ LEG   A+  W   + +LV
Sbjct: 507 LKHASQFCTCEIEHRYVLLRYTLDELNTLVDGLEGESYAVNKWASGEHRLV 557


>ref|XP_003547562.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1048

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   KTRVMTEQERMDCLPLPILLHAQKMEQDFDSTQERECFQCFYDLHLSASVCSCSSKRFAC 181
           K R+  E+ER+DCLP  + L   KM  DFD  +ERECF CFYDLHLSA  C CS  R++C
Sbjct: 486 KARIKMEEERLDCLPNHLKL--LKMNSDFDLYKERECFSCFYDLHLSAMGCECSPDRYSC 543

Query: 182 LKHAKILCSCGSGQKFFLFRYSMDELNTLVEALEGNVDALKIWVPEDLKLVVTNRNDAGV 361
           LKHA + C CG  ++F L RY++ ELN L+EALEG   A+++W  ++  ++  N N+  +
Sbjct: 544 LKHANLFCLCGLEKRFVLLRYTISELNKLLEALEGESHAIEVWANKNFGMISANANEVCL 603

Query: 362 RK--LSKD 379
            K  L KD
Sbjct: 604 DKPDLEKD 611


Top