BLASTX nr result

ID: Coptis21_contig00020434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020434
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]       311   2e-82
emb|CBI16384.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_002314070.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
gb|AAG51052.1|AC069473_14 GTPase, putative; 34281-30152 [Arabido...   307   2e-81
ref|NP_187815.2| GTP-binding protein [Arabidopsis thaliana] gi|2...   307   2e-81

>ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
          Length = 676

 Score =  311 bits (796), Expect = 2e-82
 Identities = 151/180 (83%), Positives = 164/180 (91%)
 Frame = -2

Query: 914  EQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAM 735
            EQDY+IAERIEREGKGC+IVVNKWDTIPNKN QTA+YYE+DVREKLR L WAPIVYSTA+
Sbjct: 482  EQDYRIAERIEREGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRVLGWAPIVYSTAI 541

Query: 734  VGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAI 555
             GHSV+K+IVAAS VEKERSRRLST+ILNQVV+EALAFKSPPR RGGKRGR+YYCTQAAI
Sbjct: 542  AGHSVDKIIVAASTVEKERSRRLSTSILNQVVQEALAFKSPPRNRGGKRGRVYYCTQAAI 601

Query: 554  RPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMKT 375
            RPPTFVFFVND KLF +TYRRYMEKQLR+D GF+GTPIRLLWRSRRK EK   RA   KT
Sbjct: 602  RPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKIEKNGARAASAKT 661


>emb|CBI16384.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  311 bits (796), Expect = 2e-82
 Identities = 151/180 (83%), Positives = 164/180 (91%)
 Frame = -2

Query: 914  EQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAM 735
            EQDY+IAERIEREGKGC+IVVNKWDTIPNKN QTA+YYE+DVREKLR L WAPIVYSTA+
Sbjct: 464  EQDYRIAERIEREGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRVLGWAPIVYSTAI 523

Query: 734  VGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAI 555
             GHSV+K+IVAAS VEKERSRRLST+ILNQVV+EALAFKSPPR RGGKRGR+YYCTQAAI
Sbjct: 524  AGHSVDKIIVAASTVEKERSRRLSTSILNQVVQEALAFKSPPRNRGGKRGRVYYCTQAAI 583

Query: 554  RPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMKT 375
            RPPTFVFFVND KLF +TYRRYMEKQLR+D GF+GTPIRLLWRSRRK EK   RA   KT
Sbjct: 584  RPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKIEKNGARAASAKT 643


>ref|XP_002314070.1| predicted protein [Populus trichocarpa] gi|222850478|gb|EEE88025.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  308 bits (789), Expect = 1e-81
 Identities = 147/173 (84%), Positives = 162/173 (93%)
 Frame = -2

Query: 914 EQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAM 735
           EQDY+IAERIE+EGKGC+IVVNKWDTIPNKN QTA+YYE+DVREKLR L+WAPIVYSTA+
Sbjct: 317 EQDYRIAERIEKEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRLLHWAPIVYSTAI 376

Query: 734 VGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAI 555
            GH+VEK+IVAAS VEKERSRRL T+ILNQVVREALAFK PPRTRGGKRGR+YYCTQAAI
Sbjct: 377 AGHNVEKIIVAASTVEKERSRRLGTSILNQVVREALAFKPPPRTRGGKRGRVYYCTQAAI 436

Query: 554 RPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEG 396
           RPPTFVFFVND  LF +TYRRYMEKQLR+D GF+GTPIRLLWRSRRK EK+EG
Sbjct: 437 RPPTFVFFVNDSNLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKMEKDEG 489


>gb|AAG51052.1|AC069473_14 GTPase, putative; 34281-30152 [Arabidopsis thaliana]
          Length = 659

 Score =  307 bits (787), Expect = 2e-81
 Identities = 145/179 (81%), Positives = 165/179 (92%)
 Frame = -2

Query: 914  EQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAM 735
            EQD KIAERIEREGKGC++VVNKWDTIPNKN +TA++YE+DVREKLRSL WAPIVYSTA+
Sbjct: 466  EQDLKIAERIEREGKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYSTAI 525

Query: 734  VGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAI 555
             GHSV+ ++VAA+ V+KERSRRLSTAILNQV+REA+AFKSPPRTRGGKRGR+YYCTQAAI
Sbjct: 526  TGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAI 585

Query: 554  RPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMK 378
            RPPTFVFFVND KLFSDTYRRYMEKQLRTD GFAGTPIRLLWRSR++++K  G    M+
Sbjct: 586  RPPTFVFFVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMR 644


>ref|NP_187815.2| GTP-binding protein [Arabidopsis thaliana]
            gi|209529777|gb|ACI49783.1| At3g12080 [Arabidopsis
            thaliana] gi|332641625|gb|AEE75146.1| GTP-binding protein
            [Arabidopsis thaliana]
          Length = 663

 Score =  307 bits (787), Expect = 2e-81
 Identities = 145/179 (81%), Positives = 165/179 (92%)
 Frame = -2

Query: 914  EQDYKIAERIEREGKGCVIVVNKWDTIPNKNLQTASYYEEDVREKLRSLNWAPIVYSTAM 735
            EQD KIAERIEREGKGC++VVNKWDTIPNKN +TA++YE+DVREKLRSL WAPIVYSTA+
Sbjct: 470  EQDLKIAERIEREGKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYSTAI 529

Query: 734  VGHSVEKVIVAASIVEKERSRRLSTAILNQVVREALAFKSPPRTRGGKRGRLYYCTQAAI 555
             GHSV+ ++VAA+ V+KERSRRLSTAILNQV+REA+AFKSPPRTRGGKRGR+YYCTQAAI
Sbjct: 530  TGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAI 589

Query: 554  RPPTFVFFVNDPKLFSDTYRRYMEKQLRTDVGFAGTPIRLLWRSRRKTEKEEGRAKVMK 378
            RPPTFVFFVND KLFSDTYRRYMEKQLRTD GFAGTPIRLLWRSR++++K  G    M+
Sbjct: 590  RPPTFVFFVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMR 648


Top