BLASTX nr result

ID: Coptis21_contig00020428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020428
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855...   167   2e-39
emb|CBI38268.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002302344.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|XP_002514042.1| conserved hypothetical protein [Ricinus comm...   142   3e-32
emb|CBI19266.3| unnamed protein product [Vitis vinifera]              137   2e-30

>ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855017 [Vitis vinifera]
          Length = 425

 Score =  167 bits (422), Expect = 2e-39
 Identities = 85/172 (49%), Positives = 113/172 (65%), Gaps = 20/172 (11%)
 Frame = -3

Query: 458 IAVTCSLQLSHELGICNNHKHTSKLKRL--------------------DALSFHLFNRVY 339
           +AV+ SL  SHELGIC NH H+ +LK L                    D+ SFHL + +Y
Sbjct: 1   MAVSGSLHFSHELGICKNHGHSKQLKSLMGKGKSHLLSVTLSSHASRQDSWSFHLSDSIY 60

Query: 338 QPIWSSPSRLNVFISRSSVIPIRVNEIPILKTAATAVARSYNGFPGNSFVLRLVPGLVII 159
           +PI    +R NVF   S ++P + +EIP++K A+TA+ RS N    +  VL+LVP + II
Sbjct: 61  RPINLIHNRYNVFKCNSFLVPSKAHEIPVIKIASTALMRSCNALQDSPLVLKLVPAVGII 120

Query: 158 VFAIWGLVPLVRYGRNLFLKRSDNNWKRSGAHYVTTSYLQPLLLWTGATLVC 3
           VFA+WGL PL+R  RNLF ++SDN+W++S  HYV TSYLQPLLLWTGATL+C
Sbjct: 121 VFAVWGLGPLMRQTRNLFPQKSDNSWRKSSTHYVMTSYLQPLLLWTGATLIC 172


>emb|CBI38268.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  167 bits (422), Expect = 2e-39
 Identities = 85/172 (49%), Positives = 113/172 (65%), Gaps = 20/172 (11%)
 Frame = -3

Query: 458 IAVTCSLQLSHELGICNNHKHTSKLKRL--------------------DALSFHLFNRVY 339
           +AV+ SL  SHELGIC NH H+ +LK L                    D+ SFHL + +Y
Sbjct: 1   MAVSGSLHFSHELGICKNHGHSKQLKSLMGKGKSHLLSVTLSSHASRQDSWSFHLSDSIY 60

Query: 338 QPIWSSPSRLNVFISRSSVIPIRVNEIPILKTAATAVARSYNGFPGNSFVLRLVPGLVII 159
           +PI    +R NVF   S ++P + +EIP++K A+TA+ RS N    +  VL+LVP + II
Sbjct: 61  RPINLIHNRYNVFKCNSFLVPSKAHEIPVIKIASTALMRSCNALQDSPLVLKLVPAVGII 120

Query: 158 VFAIWGLVPLVRYGRNLFLKRSDNNWKRSGAHYVTTSYLQPLLLWTGATLVC 3
           VFA+WGL PL+R  RNLF ++SDN+W++S  HYV TSYLQPLLLWTGATL+C
Sbjct: 121 VFAVWGLGPLMRQTRNLFPQKSDNSWRKSSTHYVMTSYLQPLLLWTGATLIC 172


>ref|XP_002302344.1| predicted protein [Populus trichocarpa] gi|222844070|gb|EEE81617.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  145 bits (365), Expect = 6e-33
 Identities = 70/126 (55%), Positives = 86/126 (68%)
 Frame = -3

Query: 380 RLDALSFHLFNRVYQPIWSSPSRLNVFISRSSVIPIRVNEIPILKTAATAVARSYNGFPG 201
           RLD    H  N    P    PSR NVF+ RS + P   NEIP+LK+AA A  RSY+   G
Sbjct: 1   RLDPWGLHFLNSTRGPPSPVPSRCNVFLCRSVLTPGGGNEIPVLKSAALAFTRSYDALRG 60

Query: 200 NSFVLRLVPGLVIIVFAIWGLVPLVRYGRNLFLKRSDNNWKRSGAHYVTTSYLQPLLLWT 21
           ++ VL+L+P + II FA WGL PL+  GR +FL +SDN+WK+S  HYV TSYLQPLLLWT
Sbjct: 61  SNLVLKLIPAIGIITFAAWGLGPLIWLGRTIFLHKSDNSWKKSSTHYVVTSYLQPLLLWT 120

Query: 20  GATLVC 3
           GATL+C
Sbjct: 121 GATLIC 126


>ref|XP_002514042.1| conserved hypothetical protein [Ricinus communis]
           gi|223547128|gb|EEF48625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  142 bits (359), Expect = 3e-32
 Identities = 79/171 (46%), Positives = 102/171 (59%), Gaps = 22/171 (12%)
 Frame = -3

Query: 449 TCSLQLSHELGI-----CNNHKHTSKLK-----------------RLDALSFHLFNRVYQ 336
           T S+QLS EL I     C + ++T   K                 R DA + H  + ++Q
Sbjct: 4   TGSIQLSQELKIYTSRGCGSQQNTVLGKGKSRLFLANVTLSSHGLRQDAWTLHFLSSMHQ 63

Query: 335 PIWSSPSRLNVFISRSSVIPIRVNEIPILKTAATAVARSYNGFPGNSFVLRLVPGLVIIV 156
           PI  +PSR NV + +S +      EIP++K+AA  + RSYN   G+  VL+L+P + II 
Sbjct: 64  PIRPAPSRCNVLVCQSLLTSQGGTEIPLVKSAAVVLTRSYNALSGSPLVLKLIPAISIIA 123

Query: 155 FAIWGLVPLVRYGRNLFLKRSDNNWKRSGAHYVTTSYLQPLLLWTGATLVC 3
           FA WGL PL+R GR +FL  SDNNWK+S  HYV TSYLQPLLLWTGA LVC
Sbjct: 124 FASWGLGPLLRLGRIIFLHGSDNNWKKSSTHYVLTSYLQPLLLWTGAILVC 174


>emb|CBI19266.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  137 bits (344), Expect = 2e-30
 Identities = 76/172 (44%), Positives = 100/172 (58%), Gaps = 20/172 (11%)
 Frame = -3

Query: 458 IAVTCSLQLSHELGICNNHKHTSKLK--------------------RLDALSFHLFNRVY 339
           +A+  S+QLS ELGI N H ++++ K                    R DALS HL N + 
Sbjct: 1   MALAGSMQLSRELGIQNRHGYSNQPKIMMAKDRLHLLSITLSSHASRQDALSLHLLNSMR 60

Query: 338 QPIWSSPSRLNVFISRSSVIPIRVNEIPILKTAATAVARSYNGFPGNSFVLRLVPGLVII 159
             I    SR   F+ RS + P   NEI +LK+AA  + RS N   G   VL+LVP + I+
Sbjct: 61  GSITPVSSRCEFFLCRSFLAPGGGNEISVLKSAALVLTRSCNALRGRPLVLQLVPAVSIV 120

Query: 158 VFAIWGLVPLVRYGRNLFLKRSDNNWKRSGAHYVTTSYLQPLLLWTGATLVC 3
            FA WGL PL+R  RNLFL ++D++WK+S  +YV T YLQPLLLW GA L+C
Sbjct: 121 AFAAWGLGPLMRLSRNLFLNKTDSSWKKSSTYYVLTYYLQPLLLWIGAMLIC 172


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