BLASTX nr result

ID: Coptis21_contig00020414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020414
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514908.1| lipid binding protein, putative [Ricinus com...   127   9e-28
ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored prot...   123   2e-26
emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]   120   2e-25
gb|AAM62634.1| lipid transfer protein, putative [Arabidopsis tha...   109   2e-22

>ref|XP_002514908.1| lipid binding protein, putative [Ricinus communis]
           gi|223545959|gb|EEF47462.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 184

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/129 (51%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
 Frame = -1

Query: 449 TTVKDIKDKNPVCLCFIIQQAHDGASSFKQMGLQEAKLLQLPTACNLVNANISDCPKLLN 270
           + VKD+KD +P CLCFI+QQ H+G++  K +G+QEAKLLQLP+AC L NA+IS CPKLL 
Sbjct: 58  SAVKDMKDSDPKCLCFIMQQTHNGSAEIKSLGIQEAKLLQLPSACQLQNASISFCPKLLG 117

Query: 269 LAPNSPDMGIFTNSTK-SSPATPATP-DGTPLTTKDGSSMGFKHAPLLANSIAVSIFVTM 96
           + PNSPD  IFTN+T  S+PA  ATP    P T+ +    G  H P LA  IA +IF+ +
Sbjct: 118 IPPNSPDAAIFTNATSTSTPAATATPGTSAPDTSNNDRPNGTMHRPYLA--IATAIFIYI 175

Query: 95  IIMGFSSTF 69
              G +  F
Sbjct: 176 FTAGSAYRF 184


>ref|XP_002303794.1| predicted protein [Populus trichocarpa] gi|222841226|gb|EEE78773.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
 Frame = -1

Query: 446 TVKDIKDKNPVCLCFIIQQAHDGASSFKQMGLQEAKLLQLPTACNLVNANISDCPKLLNL 267
           +V++IK+ +P CLCFI+QQ  +G++  K +G+QEAKLLQLPTAC L NA++S CPKLL +
Sbjct: 62  SVQNIKESDPKCLCFIMQQTSNGSAPIKNLGIQEAKLLQLPTACQLQNASLSFCPKLLGI 121

Query: 266 APNSPDMGIFTNSTKSSPATPATPDGTPLTTKDGSSMGFKHAPLLAN--SIAVSIFVTMI 93
           +P+SPD  IFTN++ ++    +T  GT  + K G S GF+H P LA    I  +IFV   
Sbjct: 122 SPSSPDAAIFTNASTTATPAASTSTGTSQSEKAGDSSGFQHRPHLAGFFMIVAAIFVFAS 181

Query: 92  IMGFSSTF 69
             G +S F
Sbjct: 182 PAGSASMF 189


>ref|XP_002277578.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis
           vinifera]
          Length = 201

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
 Frame = -1

Query: 449 TTVKDIKDKNPVCLCFIIQQAHDGASSFKQMGLQEAKLLQLPTACNLVNANISDCPKLLN 270
           + V +I++  PVCLC+ IQQ H+G++  K +G+QEAKLLQLP+ C L NA++SDCPKLLN
Sbjct: 66  SAVSEIRESKPVCLCYFIQQTHNGSAEVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLN 125

Query: 269 LAPNSPDMGIFT-NSTKSSPATPATPDGTPLTTKDGSSMGFKHAPLLAN--SIAVSIFVT 99
           ++ +SPD  IFT NST ++PA+ +T  GT    KD  S   K+AP LA   +IAV++F +
Sbjct: 126 ISASSPDYSIFTSNSTSTAPASTST--GTSSGAKDDGSNADKYAPSLAGTMAIAVAVFFS 183

Query: 98  MI 93
           M+
Sbjct: 184 ML 185


>emb|CAN67019.1| hypothetical protein VITISV_027707 [Vitis vinifera]
          Length = 201

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
 Frame = -1

Query: 449 TTVKDIKDKNPVCLCFIIQQAHDGASSFKQMGLQEAKLLQLPTACNLVNANISDCPKLLN 270
           + V +I+   PVCLC+ IQQ H+G+   K +G+QEAKLLQLP+ C L NA++SDCPKLLN
Sbjct: 66  SAVSEIRQSKPVCLCYFIQQTHNGSEQVKSLGIQEAKLLQLPSDCKLANASLSDCPKLLN 125

Query: 269 LAPNSPDMGIFT-NSTKSSPATPATPDGTPLTTKDGSSMGFKHAPLLAN--SIAVSIFVT 99
           ++ +SPD  IFT NST ++PA+ +T  GT    KD  S    +AP LA   +IAV+IF +
Sbjct: 126 ISASSPDYSIFTSNSTSTAPASTST--GTSSGAKDDESNADMYAPSLAGTMAIAVAIFFS 183

Query: 98  MI 93
           M+
Sbjct: 184 ML 185


>gb|AAM62634.1| lipid transfer protein, putative [Arabidopsis thaliana]
          Length = 193

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
 Frame = -1

Query: 443 VKDIKDKNPVCLCFIIQQAHDGASSFKQMGLQEAKLLQLPTACNLVNANISDCPKLLNLA 264
           V+DIK+++P CLCF+IQQA  G  + K +G+QE KL+QLPT+C L NA+I++CPKLL ++
Sbjct: 64  VEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLLGIS 123

Query: 263 PNSPDMGIFTNSTKSSPATPA-TPDGTPLTTKD-GSSMGFK--HA--PLLANSIAVSIFV 102
           P+SPD  +FTN+  ++P  PA     TP T+ D G S   K  HA   L    +AVS  +
Sbjct: 124 PSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGHAVVALAVALMAVSFVL 183

Query: 101 TM 96
           T+
Sbjct: 184 TL 185


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