BLASTX nr result

ID: Coptis21_contig00020405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020405
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519373.1| leucine-rich repeat containing protein, puta...    79   4e-13
ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca...    79   5e-13
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trich...    78   7e-13
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    77   1e-12

>ref|XP_002519373.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223541440|gb|EEF42990.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1208

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +2

Query: 11   NSSSLANLKHXXXXXXXXXXXXPEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVS 190
            ++S L+ LK             PE  L NL SLE + I+ CPR+  LP +G   LTSL +
Sbjct: 986  SASPLSKLKSLQLVRIDDLKSLPEIWLPNLTSLELIKIEECPRLQCLPGEGFRALTSLRT 1045

Query: 191  LKISDCESLASLS-GMRYLTALQNLHLARCEKMHILEDDM 307
            L+I  CE+L +LS G++YLTAL+ L +  CEK+H+ +D M
Sbjct: 1046 LRIYRCENLKTLSQGIQYLTALEELRIKSCEKLHLSDDGM 1085


>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1088

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77   PEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTAL 253
            PE+GL+NL SLE L+I FC R+  LP  GL GL+SL  LKI  C+   SL+ G+R+LTAL
Sbjct: 965  PEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLTAL 1024

Query: 254  QNLHLARCEKMHILEDDMDGLTSLR 328
            ++L L  C +++ L + +  LTSL+
Sbjct: 1025 EDLELGNCPELNSLPESIQHLTSLQ 1049


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77  PEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTAL 253
           PE+GL+NL SLE L+I FC R+  LP  GL GL+SL  LKI  C+   SL+ G+R+LTAL
Sbjct: 355 PEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLTAL 414

Query: 254 QNLHLARCEKMHILEDDMDGLTSLR 328
           ++L L  C +++ L + +  LTSL+
Sbjct: 415 EDLELGNCPELNSLPESIQHLTSLQ 439


>ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844685|gb|EEE82232.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1285

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17   SSLANLKHXXXXXXXXXXXXPEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVSLK 196
            +SL+ LK             P++GL+NL SLE L I+ C R+ SLP  GL GL+SL  L 
Sbjct: 826  TSLSALKSLTIESCYELESLPDEGLRNLTSLEVLEIQTCRRLNSLPMNGLCGLSSLRRLS 885

Query: 197  ISDCESLASLS-GMRYLTALQNLHLARCEKMHILEDDMDGLTSLR 328
            I  C+  ASLS G+R+LTAL++L L  C +++ L + +  L+SLR
Sbjct: 886  IHICDQFASLSEGVRHLTALEDLSLFGCPELNSLPESIQHLSSLR 930



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17   SSLANLKHXXXXXXXXXXXXPEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVSLK 196
            +SL+ LK             PE+GLQNL SLE L I  C R+ SLP   L  L+SL  L 
Sbjct: 1094 TSLSALKSLTIQSCNELESIPEEGLQNLTSLEILEILSCKRLNSLPMNELCSLSSLRHLS 1153

Query: 197  ISDCESLASLS-GMRYLTALQNLHLARCEKMHILEDDMDGLTSLR 328
            I  C+  ASLS G+R+LTAL++L L  C +++ L + +  +TSLR
Sbjct: 1154 IHFCDQFASLSEGVRHLTALEDLSLFGCHELNSLPESIQHITSLR 1198


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77   PEDGLQNLASLETLNIKFCPRMASLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTAL 253
            PE+GL+NL SLE+L I+ C R+  LP  GL GL+SL  L +  C+   SLS G+R+LTAL
Sbjct: 957  PEEGLRNLNSLESLYIRGCGRLNCLPMDGLCGLSSLRKLVVGSCDKFTSLSEGVRHLTAL 1016

Query: 254  QNLHLARCEKMHILEDDMDGLTSLR 328
            ++LHL  C +++ L + +  LTSL+
Sbjct: 1017 EDLHLDGCPELNSLPESIQHLTSLQ 1041


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