BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020400
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2...   337   3e-90
ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   333   5e-89
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...   328   2e-87
emb|CAA98163.1| RAB1X [Lotus japonicus]                               321   1e-85

>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  338 bits (866), Expect = 2e-90
 Identities = 168/208 (80%), Positives = 192/208 (92%), Gaps = 1/208 (0%)
 Frame = +2

Query: 17  MGSSSGSCDYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKKLK 196
           MGSSSGS D SFKILLIGDSGVGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGK+LK
Sbjct: 1   MGSSSGSYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLK 60

Query: 197 LTIWDTAGQERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIK 376
           LTIWDTAGQERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEVEL+STNQDC+K
Sbjct: 61  LTIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVK 120

Query: 377 MLVGNKVDRDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLL 556
           MLVGNKVD++  R+VT++EG+ALA++H C+FLECSAKT++NV+QCFEELALKI+EVPSLL
Sbjct: 121 MLVGNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPSLL 180

Query: 557 EEGSTVVKRNSLKQK-QVHKAPSGSCCS 637
           EEGST VKRN LKQK + H A +G CCS
Sbjct: 181 EEGSTAVKRNILKQKPEHHVASNGGCCS 208


>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  337 bits (863), Expect = 3e-90
 Identities = 168/208 (80%), Positives = 188/208 (90%), Gaps = 2/208 (0%)
 Frame = +2

Query: 20  GSSSGSCDYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKKLKL 199
           G SSGS D SFKILLIGDSGVGKSSLLV+FIS+SVE ++PTIGVDFKIKQL VGGK+LKL
Sbjct: 6   GQSSGSYDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKL 65

Query: 200 TIWDTAGQERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIKM 379
           TIWDTAGQERFRT+TSSYYR AQGIILVYDVTRRE+FTNL+DVW KEV+LYSTNQDC+KM
Sbjct: 66  TIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKM 125

Query: 380 LVGNKVDRDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLLE 559
           LVGNKVD+D ER+VTR+EG++LA+EH C FLECSAKT+QNV+QCFEELALKI+EVPSL+E
Sbjct: 126 LVGNKVDKDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLME 185

Query: 560 EGSTVVKRNSLKQKQVHKAPS--GSCCS 637
           EGST VKRN LKQK     PS  G CCS
Sbjct: 186 EGSTAVKRNILKQKPDQHPPSSGGGCCS 213


>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  333 bits (853), Expect = 5e-89
 Identities = 171/211 (81%), Positives = 190/211 (90%), Gaps = 4/211 (1%)
 Frame = +2

Query: 17  MGSSSG---SCDYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGK 187
           MGSSSG   S D SFKILLIGDS VGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGK
Sbjct: 1   MGSSSGQSSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 188 KLKLTIWDTAGQERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQD 367
           +LKLTIWDTAGQERFRT+TSSYYR AQGIILVYDVTRRESFTNL+DVWAKEVELYSTNQD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQD 120

Query: 368 CIKMLVGNKVDRDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVP 547
           C+KMLVGNKVDR+ ER V+REEGIALA+EH C+F ECSAKT++NV++CFEELALKI+EVP
Sbjct: 121 CVKMLVGNKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVP 180

Query: 548 SLLEEGSTVVKRNSLKQKQVHK-APSGSCCS 637
           SLLEEGSTV KRN LK K  ++  P+G CCS
Sbjct: 181 SLLEEGSTVGKRNILKPKPENQPPPTGGCCS 211


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score =  328 bits (840), Expect = 2e-87
 Identities = 167/210 (79%), Positives = 188/210 (89%), Gaps = 3/210 (1%)
 Frame = +2

Query: 17  MGSSSGSCDY--SFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKK 190
           MGSSSG   Y  SFKILLIGDSGVGKSSLLV+FIS+SVE L+PTIGVDFKIKQL VGGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 191 LKLTIWDTAGQERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDC 370
           LKLTIWDTAGQERFRT+TSSYYR AQGIILVYDVTRRE+FTNL DVW KE+ELYSTNQ+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 371 IKMLVGNKVDRDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPS 550
           ++MLVGNKVDR+ ER V+REEGIALA+E  C+FLECSA+T+QNV+QCFEELALKI+EVPS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 551 LLEEGSTVVKRNSLKQKQVHKAPSGS-CCS 637
           LLEEGS+ VKRN LKQK  H+  + S CCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210


>emb|CAA98163.1| RAB1X [Lotus japonicus]
          Length = 208

 Score =  321 bits (823), Expect = 1e-85
 Identities = 161/208 (77%), Positives = 183/208 (87%), Gaps = 1/208 (0%)
 Frame = +2

Query: 17  MGSSSGSCDYSFKILLIGDSGVGKSSLLVTFISNSVEHLSPTIGVDFKIKQLIVGGKKLK 196
           M SSSG  D SFKILLIGDSGVGKSSLLV+FIS+SVE  SPTIGVDFKIK L VGGK+LK
Sbjct: 1   MSSSSGGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRLK 60

Query: 197 LTIWDTAGQERFRTVTSSYYRAAQGIILVYDVTRRESFTNLADVWAKEVELYSTNQDCIK 376
           LT+WDTAGQERFRT+TSSYYR AQGIILVYDVT+RE+FTNL++VW+KE+ELYS NQDC+K
Sbjct: 61  LTLWDTAGQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQDCVK 120

Query: 377 MLVGNKVDRDIEREVTREEGIALAQEHKCIFLECSAKTQQNVQQCFEELALKILEVPSLL 556
           MLVGNKVDRD  R V+REEG+ALA+E  C+ +ECSAKT++NV+QCFEELALKI+E PSLL
Sbjct: 121 MLVGNKVDRDAARAVSREEGLALAKELGCLLIECSAKTRENVEQCFEELALKIMEAPSLL 180

Query: 557 EEGSTVVKRNSLKQKQVHKAPS-GSCCS 637
           EEGST VKRN LKQKQ  +A   G CCS
Sbjct: 181 EEGSTAVKRNILKQKQEPQASQHGGCCS 208