BLASTX nr result

ID: Coptis21_contig00020397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020397
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR famil...    93   3e-17
emb|CBI20796.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus...    89   4e-16
ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing ...    86   2e-15
ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome
           X-like [Vitis vinifera]
          Length = 467

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
 Frame = -2

Query: 262 SYFRLWFTQ-TFLPKSYQYPRHPRV-TQNRKSLCIITGATSGLGKEAARALSREGFYVVL 89
           SY  L+  +  F  KS  YPR P   T   + LCIITGATSGLGK AA ALS+EGFYVVL
Sbjct: 33  SYLHLFIQRFPFSRKSNSYPRCPPANTATFRPLCIITGATSGLGKAAAYALSKEGFYVVL 92

Query: 88  AAKSGDLLSKTIVELKQKDPDAHVKAFQV 2
             +S  LLSKT+VE+K+K+ +AH+K FQV
Sbjct: 93  VGRSSHLLSKTMVEIKEKNKNAHLKGFQV 121


>emb|CBI20796.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
 Frame = -2

Query: 262 SYFRLWFTQ-TFLPKSYQYPRHPRV-TQNRKSLCIITGATSGLGKEAARALSREGFYVVL 89
           SY  L+  +  F  KS  YPR P   T   + LCIITGATSGLGK AA ALS+EGFYVVL
Sbjct: 12  SYLHLFIQRFPFSRKSNSYPRCPPANTATFRPLCIITGATSGLGKAAAYALSKEGFYVVL 71

Query: 88  AAKSGDLLSKTIVELKQKDPDAHVKAFQV 2
             +S  LLSKT+VE+K+K+ +AH+K FQV
Sbjct: 72  VGRSSHLLSKTMVEIKEKNKNAHLKGFQV 100


>ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223550345|gb|EEF51832.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 369

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 SYFRLWFTQTFLPKSYQYPR-HPRVTQNRKSLCIITGATSGLGKEAARALSREGFYVVLA 86
           SYF L+F   F   S+ YP   P  +   + LC+ITGATSGLG+ AA ALSREGF+VVLA
Sbjct: 31  SYFELYFQNMFGRSSHPYPHCFPPTSGIARPLCVITGATSGLGEAAAYALSREGFFVVLA 90

Query: 85  AKSGDLLSKTIVELKQKDPDAHVKAFQV 2
            +S  LLSKT+  + +++ DA VKAF+V
Sbjct: 91  GRSSKLLSKTVERINKQNRDAQVKAFEV 118


>ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|44681364|gb|AAS47622.1| At5g04070
           [Arabidopsis thaliana] gi|45773892|gb|AAS76750.1|
           At5g04070 [Arabidopsis thaliana]
           gi|332003310|gb|AED90693.1| Rossmann-fold NAD(P)-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 359

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/88 (50%), Positives = 59/88 (67%)
 Frame = -2

Query: 265 FSYFRLWFTQTFLPKSYQYPRHPRVTQNRKSLCIITGATSGLGKEAARALSREGFYVVLA 86
           FSYF+L     F PKS       +   +   +C+ITGATSGLGK  A ALSR+GFYVVL 
Sbjct: 29  FSYFQLLKKSIFAPKSSSSSSCSKFNHSHTPVCVITGATSGLGKATAFALSRKGFYVVLV 88

Query: 85  AKSGDLLSKTIVELKQKDPDAHVKAFQV 2
            +S  LLSKT+ ++K+++ DA +KAF+V
Sbjct: 89  GRSSHLLSKTLSDIKRQNEDAKLKAFEV 116


>ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|222847786|gb|EEE85333.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 SYFRLWFTQTFLPKSYQYPR-HPRVTQNRKSLCIITGATSGLGKEAARALSREGFYVVLA 86
           SYF+L++ + F  K   YPR  P+    +K +C+ITGATSG+G  AA  LS+EGFYVVL 
Sbjct: 12  SYFQLFWQRVFTKKPNAYPRCPPQRIGTKKPICVITGATSGIGAAAAYDLSKEGFYVVLV 71

Query: 85  AKSGDLLSKTIVELKQKDPDAHVKAFQV 2
            +S  LLSK I  + +K+ DA V+AF+V
Sbjct: 72  GRSSQLLSKMIEWIHKKNKDACVEAFEV 99


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