BLASTX nr result

ID: Coptis21_contig00020375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020375
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   432   e-119
ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   431   e-118
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              430   e-118

>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
            [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
            partial [Cucumis sativus]
          Length = 1269

 Score =  432 bits (1111), Expect = e-119
 Identities = 218/314 (69%), Positives = 254/314 (80%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGALEQSSF 182
            PDVRFVIHHSLPKSIEGYHQECGRAGRDG RSSCVLYY Y DYIRVKHMISQGA EQS  
Sbjct: 804  PDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPL 863

Query: 183  ASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFSPLNCSRTCDN 362
             SG  R +L +S R LETN ENLLRMVSYCENDVDCRRLLQL+HFGEKF P NC +TCDN
Sbjct: 864  VSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCKKTCDN 923

Query: 363  CAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKYRHNSLSLHGA 542
            C K ++  EKDVTD +KQLV+LVR+ GQQ SS+HIL+VY+GS++Q VKK+RH  LSLHG 
Sbjct: 924  CLKSTNLIEKDVTDISKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGT 983

Query: 543  GKHLAKGEASRILRHLVIEDVLVEEVKKSDLYGSVSSVLKVNESKARDLQSGGKKFIIRF 722
            GKHL K EASRIL HLVIED+LVEEV+KSD+YGSVSS+LKVNE+K R L +GG++  +RF
Sbjct: 984  GKHLLKSEASRILHHLVIEDILVEEVRKSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRF 1043

Query: 723  PASTKAVKLRKPEETPAKGPLFSGKIDSSLNDAAAQPQGAPNFFLI--LFEALKKMRSVL 896
            P+STK  KL K E TPAKG L SGK+  ++ D  AQPQ   +  L   L+ +L+ +R+ L
Sbjct: 1044 PSSTKTNKLSKFEMTPAKGSLVSGKMYPNI-DTPAQPQSEVDVQLSAELYSSLRMLRTNL 1102

Query: 897  LKEAGEGVMAYHIF 938
            +KEA +GVMAYHIF
Sbjct: 1103 VKEAADGVMAYHIF 1116


>ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|222840582|gb|EEE78129.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  432 bits (1110), Expect = e-119
 Identities = 219/314 (69%), Positives = 249/314 (79%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3   PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGALEQSSF 182
           PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY Y DYIRVKHMI QG  EQS +
Sbjct: 15  PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMIIQGQAEQSPW 74

Query: 183 ASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFSPLNCSRTCDN 362
            +G  R ++ +SDR LE N ENLLRMVSY ENDVDCRRLLQL+HFGEKF   NC  TCDN
Sbjct: 75  TAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCRRLLQLLHFGEKFDAGNCGNTCDN 134

Query: 363 CAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKYRHNSLSLHGA 542
           C+K     E+DVT++AKQLVELV+  GQ  SSSHIL+VY+GS++Q VK++RH +LSLHGA
Sbjct: 135 CSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQFVKRHRHENLSLHGA 194

Query: 543 GKHLAKGEASRILRHLVIEDVLVEEVKKSDLYGSVSSVLKVNESKARDLQSGGKKFIIRF 722
           GKHLAKGEASRILRHLVIED L E+VKKSD YGSVSSVLKVNESKA  L SGG++ ++RF
Sbjct: 195 GKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLCSGGQRIVLRF 254

Query: 723 PASTKAVKLRKPEETPAKGPLFSGKIDSSLNDAAAQPQGAP--NFFLILFEALKKMRSVL 896
           P+S KA K  K E TPAKG L SGK+      + AQPQ     N    LF AL+ +R+ L
Sbjct: 255 PSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLFSALRMLRTAL 314

Query: 897 LKEAGEGVMAYHIF 938
           LKEAG+GVMAYHIF
Sbjct: 315 LKEAGDGVMAYHIF 328


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
            predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  432 bits (1110), Expect = e-119
 Identities = 219/314 (69%), Positives = 249/314 (79%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGALEQSSF 182
            PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY Y DYIRVKHMI QG  EQS +
Sbjct: 745  PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMIIQGQAEQSPW 804

Query: 183  ASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFSPLNCSRTCDN 362
             +G  R ++ +SDR LE N ENLLRMVSY ENDVDCRRLLQL+HFGEKF   NC  TCDN
Sbjct: 805  TAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCRRLLQLLHFGEKFDAGNCGNTCDN 864

Query: 363  CAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKYRHNSLSLHGA 542
            C+K     E+DVT++AKQLVELV+  GQ  SSSHIL+VY+GS++Q VK++RH +LSLHGA
Sbjct: 865  CSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQFVKRHRHENLSLHGA 924

Query: 543  GKHLAKGEASRILRHLVIEDVLVEEVKKSDLYGSVSSVLKVNESKARDLQSGGKKFIIRF 722
            GKHLAKGEASRILRHLVIED L E+VKKSD YGSVSSVLKVNESKA  L SGG++ ++RF
Sbjct: 925  GKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLCSGGQRIVLRF 984

Query: 723  PASTKAVKLRKPEETPAKGPLFSGKIDSSLNDAAAQPQGAP--NFFLILFEALKKMRSVL 896
            P+S KA K  K E TPAKG L SGK+      + AQPQ     N    LF AL+ +R+ L
Sbjct: 985  PSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLFSALRMLRTAL 1044

Query: 897  LKEAGEGVMAYHIF 938
            LKEAG+GVMAYHIF
Sbjct: 1045 LKEAGDGVMAYHIF 1058


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
            gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
            [Ricinus communis]
          Length = 1233

 Score =  431 bits (1108), Expect = e-118
 Identities = 218/314 (69%), Positives = 253/314 (80%), Gaps = 2/314 (0%)
 Frame = +3

Query: 3    PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGALEQSSF 182
            PDVRFVIHHSLPKSIEGYHQECGRAGRDG RSSCVLYY Y DYIRVKHMI QG +EQS +
Sbjct: 746  PDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMIVQGQIEQSPW 805

Query: 183  ASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFSPLNCSRTCDN 362
              G  R +  NSDR LE N ENLLRMVSYCENDVDCRR+LQL+HFGEKF+  NC +TCDN
Sbjct: 806  TPGYNRINNTNSDRILEKNTENLLRMVSYCENDVDCRRILQLLHFGEKFNSGNCKKTCDN 865

Query: 363  CAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKYRHNSLSLHGA 542
            C++     EKDVT+TAKQLV+LV+  GQQ SSSHIL+VY+GS+NQ VKKYRH +LSLHGA
Sbjct: 866  CSQIKALVEKDVTETAKQLVQLVKLTGQQFSSSHILEVYRGSLNQYVKKYRHETLSLHGA 925

Query: 543  GKHLAKGEASRILRHLVIEDVLVEEVKKSDLYGSVSSVLKVNESKARDLQSGGKKFIIRF 722
            GKHL+KGEASRILRHLV +D L E+VKKSD+YGSVSS+LKVNESKA +L SGG+  I+RF
Sbjct: 926  GKHLSKGEASRILRHLVTDDFLQEDVKKSDVYGSVSSILKVNESKAYNLCSGGQTIILRF 985

Query: 723  PASTKAVKLRKPEETPAKGPLFSGKIDSSLNDAAAQPQGAPNFFL--ILFEALKKMRSVL 896
            P++ KA K  K + TPAKG L SGK      D+ AQ Q   +  L  IL+ AL+ +R++L
Sbjct: 986  PSTMKASKPSKFDATPAKGSLTSGKQSPPEVDSPAQAQPEVDLHLSAILYSALRMLRTLL 1045

Query: 897  LKEAGEGVMAYHIF 938
            +KEAGEGVMAYHIF
Sbjct: 1046 VKEAGEGVMAYHIF 1059


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  430 bits (1106), Expect = e-118
 Identities = 218/313 (69%), Positives = 250/313 (79%), Gaps = 1/313 (0%)
 Frame = +3

Query: 3    PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGALEQSSF 182
            PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY Y DYIRVKHMI+QG +EQS  
Sbjct: 723  PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPL 782

Query: 183  ASGSRRFSLANSDRALETNIENLLRMVSYCENDVDCRRLLQLIHFGEKFSPLNCSRTCDN 362
            ASG  R ++A+S R LETN ENLLRMVSYCENDVDCRRLLQL+HFGEKF   +C +TCDN
Sbjct: 783  ASGQNRSNMASSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 842

Query: 363  CAKDSHCTEKDVTDTAKQLVELVRTAGQQNSSSHILDVYKGSMNQNVKKYRHNSLSLHGA 542
            C K     EKDVT+ AKQLVELV+   +Q SSSHIL+VY+GS++Q VKK+RH +L LH A
Sbjct: 843  CLKIKSFVEKDVTEIAKQLVELVKLTREQFSSSHILEVYRGSLSQYVKKHRHETLGLHAA 902

Query: 543  GKHLAKGEASRILRHLVIEDVLVEEVKKSDLYGSVSSVLKVNESKARDLQSGGKKFIIRF 722
            GKHLAKGEASRILRHLV ED L+E+VKKSD+YGSVSSVLKVNESK   L SGG+K I+RF
Sbjct: 903  GKHLAKGEASRILRHLVTEDFLMEDVKKSDIYGSVSSVLKVNESKVYKLFSGGQKIILRF 962

Query: 723  PASTKAVKLRKPEETPAKGPLFSGKID-SSLNDAAAQPQGAPNFFLILFEALKKMRSVLL 899
            P+S K+ KL   E TPAKG L SGK+    +   A  P+   N    L+ AL+ +R+VL+
Sbjct: 963  PSSAKSSKLSNFEATPAKGSLTSGKLSPPRIETPAHLPEVDLNLSAKLYSALRILRTVLV 1022

Query: 900  KEAGEGVMAYHIF 938
            KEAGEGVMAYHIF
Sbjct: 1023 KEAGEGVMAYHIF 1035


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