BLASTX nr result

ID: Coptis21_contig00020374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020374
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29756.3| unnamed protein product [Vitis vinifera]              348   3e-94
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   348   3e-94
ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like...   346   1e-93
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   346   2e-93
ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago trun...   346   2e-93

>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  348 bits (894), Expect = 3e-94
 Identities = 162/186 (87%), Positives = 172/186 (92%)
 Frame = +1

Query: 1    DLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVXXXXXXXXXSVKEDVVRALG 180
            +LLSRIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTPV         SVKEDVV+ALG
Sbjct: 556  ELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALG 615

Query: 181  LVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENHFDECGIIYCLSRMDCEKVAEK 360
            LVNCIIFRQSFNRPNL YSV+PKT+ CLDDIDKF++ENHFDECGIIYCLSR+DCEKVAE+
Sbjct: 616  LVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAER 675

Query: 361  LQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 540
            LQECGHKA+FYHGSMDP +R FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK
Sbjct: 676  LQECGHKAAFYHGSMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 735

Query: 541  SIEGYH 558
            SIEGYH
Sbjct: 736  SIEGYH 741


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
          Length = 1224

 Score =  348 bits (894), Expect = 3e-94
 Identities = 162/186 (87%), Positives = 172/186 (92%)
 Frame = +1

Query: 1    DLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVXXXXXXXXXSVKEDVVRALG 180
            +LLSRIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTPV         SVKEDVV+ALG
Sbjct: 545  ELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALG 604

Query: 181  LVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENHFDECGIIYCLSRMDCEKVAEK 360
            LVNCIIFRQSFNRPNL YSV+PKT+ CLDDIDKF++ENHFDECGIIYCLSR+DCEKVAE+
Sbjct: 605  LVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAER 664

Query: 361  LQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 540
            LQECGHKA+FYHGSMDP +R FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK
Sbjct: 665  LQECGHKAAFYHGSMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 724

Query: 541  SIEGYH 558
            SIEGYH
Sbjct: 725  SIEGYH 730


>ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
          Length = 1534

 Score =  346 bits (888), Expect = 1e-93
 Identities = 162/186 (87%), Positives = 170/186 (91%)
 Frame = +1

Query: 1    DLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVXXXXXXXXXSVKEDVVRALG 180
            +LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFPNTPV         SVKEDVV+ALG
Sbjct: 904  ELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALG 963

Query: 181  LVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENHFDECGIIYCLSRMDCEKVAEK 360
            LVNCIIFRQSFNRPNL YSVIPKTK CL+DIDKF++ENHFDECGI+YCLSRMDCEKVAEK
Sbjct: 964  LVNCIIFRQSFNRPNLRYSVIPKTKKCLEDIDKFIRENHFDECGIVYCLSRMDCEKVAEK 1023

Query: 361  LQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 540
            LQECGHK +FYHGSMDP QR  VQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK
Sbjct: 1024 LQECGHKCAFYHGSMDPVQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 1083

Query: 541  SIEGYH 558
            SIEGYH
Sbjct: 1084 SIEGYH 1089


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
            [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
            partial [Cucumis sativus]
          Length = 1269

 Score =  346 bits (887), Expect = 2e-93
 Identities = 160/185 (86%), Positives = 170/185 (91%)
 Frame = +1

Query: 4    LLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVXXXXXXXXXSVKEDVVRALGL 183
            LL+RIVIDEAHCVSQWGHDFRPDYQ LGILKQKFP  PV         SVKEDVV+ALGL
Sbjct: 638  LLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPKIPVLALTATATASVKEDVVQALGL 697

Query: 184  VNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENHFDECGIIYCLSRMDCEKVAEKL 363
            +NCIIFRQSFNRPNL YSVIPKTK C+DDIDKF+KENHFDECGI+YCLSRMDCEKVAE+L
Sbjct: 698  INCIIFRQSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERL 757

Query: 364  QECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 543
            QECGHKA+FYHGSMDP QR+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS
Sbjct: 758  QECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 817

Query: 544  IEGYH 558
            IEGYH
Sbjct: 818  IEGYH 822


>ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
            gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1
            [Medicago truncatula]
          Length = 1156

 Score =  346 bits (887), Expect = 2e-93
 Identities = 158/186 (84%), Positives = 170/186 (91%)
 Frame = +1

Query: 1    DLLSRIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVXXXXXXXXXSVKEDVVRALG 180
            +LLSRIVIDEAHCVSQWGHDFRPDYQ LG+LKQKFPNTPV         SVKEDVV+ALG
Sbjct: 528  ELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALG 587

Query: 181  LVNCIIFRQSFNRPNLLYSVIPKTKNCLDDIDKFVKENHFDECGIIYCLSRMDCEKVAEK 360
            LVNC++FRQSFNRPNL YSV+PKTK CL+DIDKF++ENHFDECGIIYCLSRMDCEKVAEK
Sbjct: 588  LVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEK 647

Query: 361  LQECGHKASFYHGSMDPQQRTFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 540
            LQECGHK +FYHGSMDP QR  VQ+QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK
Sbjct: 648  LQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPK 707

Query: 541  SIEGYH 558
            S+EGYH
Sbjct: 708  SVEGYH 713


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