BLASTX nr result

ID: Coptis21_contig00020370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020370
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Viti...   293   6e-77
gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   276   4e-72
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   276   4e-72
ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like...   258   2e-66
ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65

>ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
            gi|147811360|emb|CAN61228.1| hypothetical protein
            VITISV_004677 [Vitis vinifera]
          Length = 342

 Score =  293 bits (749), Expect = 6e-77
 Identities = 162/287 (56%), Positives = 183/287 (63%), Gaps = 3/287 (1%)
 Frame = +2

Query: 176  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPG--DHFIIEDLLDFSNEDIAIGDGT 349
            MEAPEFFQ  +  +      SQ+  EKR S DTKPG  DHFIIEDLLDFSN+D  I DGT
Sbjct: 1    MEAPEFFQGGFCIAPA----SQFGTEKRIS-DTKPGGGDHFIIEDLLDFSNDDAVITDGT 55

Query: 350  FDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMAACHSLPDAQFSGELCVPYDDLAEL 529
            FD +TG                  SG EP F GD+ +  +  DA FS +LCVPYDDLAEL
Sbjct: 56   FDTVTGTSTDSSTFTIVDSCNSV-SGCEPQFAGDIGS-RNYTDAHFSSDLCVPYDDLAEL 113

Query: 530  EWLSNFVEDSFSSDDLQKLQLISGMKARTNEVSETHDYQPENNRSNPIFSPDVSVPGKAR 709
            EWLSN VE+SFSS+DL+KLQLISGMKA T E SET D+QPENN++ P+   D   P KAR
Sbjct: 114  EWLSNIVEESFSSEDLEKLQLISGMKANTEEASETRDFQPENNQNPPLSLRDF--PAKAR 171

Query: 710  SKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXEVADSGTGN-SDGR 886
            SKR+RA PC W                       G           E  +   G  SDGR
Sbjct: 172  SKRARAMPCKWTSRLLALSPTSSLSETDIIPPNSGKKSTKSAPKKKESPEVVAGGCSDGR 231

Query: 887  KCLHCATDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPT 1027
            KCLHCATDKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPA+SPT
Sbjct: 232  KCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 278


>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  276 bits (707), Expect = 4e-72
 Identities = 160/317 (50%), Positives = 187/317 (58%), Gaps = 33/317 (10%)
 Frame = +2

Query: 176  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKP--------GDHFIIEDLLDFSNEDI 331
            MEAPE+++ T+          Q+TPEKRHS D+          GDHF++EDLLDFSNED 
Sbjct: 1    MEAPEYYKKTFCP--------QFTPEKRHSFDSSNNKTAIGGGGDHFMVEDLLDFSNEDD 52

Query: 332  A-IGDG----TFDNITGXXXXXXXXXXXXXXXXX-YSGSEPHFTGDMAACHSLPDAQFSG 493
            A I DG     FDN+ G                  +SGSEP+F        +L D  FS 
Sbjct: 53   AVITDGGCPAAFDNVIGNSTDSSPLNVIDSCNSSSFSGSEPNF-----GSRNLADGPFSS 107

Query: 494  ELCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVS-ETHDYQPE------ 652
            +LCVP DDLAELEWLSNFVE+SFSS+DLQKLQLISGMK R ++ + ET  +QP+      
Sbjct: 108  DLCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGMKPRPDQAAFETRQFQPDPTRTNN 167

Query: 653  --NNRSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXGXXXX 826
              N  +NPIF+P+VSVP KARSKRSRAAPCNW                            
Sbjct: 168  NPNGNNNPIFNPEVSVPAKARSKRSRAAPCNWTSRLLLLSTPEQSDVVVSAAEAASPLPP 227

Query: 827  XXXXXXXEVAD----------SGTGNSDGRKCLHCATDKTPQWRTGPLGPKTLCNACGVR 976
                    V            SG G  DGRKC+HCATDKTPQWRTGP+GPKTLCNACGVR
Sbjct: 228  PSSTGKKTVKSAPKKKESQEGSGGGPGDGRKCMHCATDKTPQWRTGPMGPKTLCNACGVR 287

Query: 977  FKSGRLVPEYRPASSPT 1027
            +KSGRLVPEYRPA+SPT
Sbjct: 288  YKSGRLVPEYRPAASPT 304


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  276 bits (707), Expect = 4e-72
 Identities = 149/286 (52%), Positives = 180/286 (62%), Gaps = 2/286 (0%)
 Frame = +2

Query: 176  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPGDHFIIEDLLDFSNEDIAIGDGTFD 355
            MEA  FF   Y S+  +    +++ EKR   + KPGDHF++EDLLDF N+D  + DG FD
Sbjct: 1    MEASSFFPGGYYSAGAD----EFSQEKR---EQKPGDHFLVEDLLDFPNDDDIMTDGFFD 53

Query: 356  NITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMAACHSLPDAQFSGELCVPYDDLAELEW 535
             +TG                  SG+EPHF+GD+  C +  DAQFSGELCVP D+LAELEW
Sbjct: 54   TVTGNSTDSSTVTVVDSCNSSLSGNEPHFSGDVG-CRNFTDAQFSGELCVPCDELAELEW 112

Query: 536  LSNFVEDSFSSDDLQKLQLISGMKA--RTNEVSETHDYQPENNRSNPIFSPDVSVPGKAR 709
            LSNFVE+SFSS+DL K+Q++SG+KA   T E  E   +QPE  RS PI  P ++VPGKAR
Sbjct: 113  LSNFVEESFSSEDLHKIQVLSGIKAPLHTTESPEP-QFQPETARSEPILQPPMNVPGKAR 171

Query: 710  SKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXEVADSGTGNSDGRK 889
            SKR R+ PC+W+                                  E +DS     DGRK
Sbjct: 172  SKRPRSVPCDWSTRLLVLSPATSSSESDAFK----KPPKTTSSKKKENSDSA---GDGRK 224

Query: 890  CLHCATDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPT 1027
            CLHCA +KTPQWRTGP+GPKTLCNACGVRFKSGRLVPEYRPASSPT
Sbjct: 225  CLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPT 270


>ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 366

 Score =  258 bits (658), Expect = 2e-66
 Identities = 136/276 (49%), Positives = 164/276 (59%), Gaps = 23/276 (8%)
 Frame = +2

Query: 269  DTKPGDHFIIEDLLDFSNEDIAIGDGTFDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTG 448
            D    DHFI+EDLLDFSN+D+ I D TFD+IT                  +SGS+P+   
Sbjct: 16   DNNNSDHFIVEDLLDFSNDDVVITDATFDSIT-TDSSTVTTTVHSCNSSSFSGSDPNTVP 74

Query: 449  DMAACHSLPDAQFSGELCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVS 628
            D+ +  +L D  FS +LCVPYDD+AELEWLSNFVE+SFSS+DL K+QLISGM A+ N+VS
Sbjct: 75   DIGS-RNLSDGHFSDDLCVPYDDIAELEWLSNFVEESFSSEDLHKMQLISGMNAQNNDVS 133

Query: 629  ETHDYQ------------PENNRSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXX 772
            E  ++             PE  R++PIF+ +VSVP KARSKRSR  PCNWA         
Sbjct: 134  EAREFHYEPTTTRSGSHTPEPTRNSPIFNSEVSVPAKARSKRSRGPPCNWASRLLVLSPT 193

Query: 773  XXXXXXXXXXXXXG-----------XXXXXXXXXXXEVADSGTGNSDGRKCLHCATDKTP 919
                                                  +D      DGR+CLHCATDKTP
Sbjct: 194  SSSSDNEVVVPSPATAEPCPTPAKKMAKVGPRKKDSSSSDGNGSGGDGRRCLHCATDKTP 253

Query: 920  QWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPT 1027
            QWRTGP+GPKTLCNACGVR+KSGRLVPEYRPA+SPT
Sbjct: 254  QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 289


>ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|222854574|gb|EEE92121.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  254 bits (649), Expect = 2e-65
 Identities = 152/308 (49%), Positives = 178/308 (57%), Gaps = 24/308 (7%)
 Frame = +2

Query: 176  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKP----GDHFIIEDLLDFSNED--IAI 337
            MEAPE +  T   SS+  +N     EK HS D+      GDHFI+EDLLDFSNED    +
Sbjct: 1    MEAPELYGTTGFCSSQFTSN-----EKHHSLDSNKSIGGGDHFIVEDLLDFSNEDEDAMV 55

Query: 338  GDGTFDNI----TGXXXXXXXXXXXXXXXXXYSGSEPH-FTGDMAACHSLPDAQFSGELC 502
             D + +NI    T                  +SG EP  F GD+            GELC
Sbjct: 56   TDPSNNNIVTPTTNSTDSSTVTFVDSCNSSSFSGCEPSGFNGDI------------GELC 103

Query: 503  VPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVSETHDYQPENN-------- 658
            VPYDDLAELEWLSNFVE+SFSS+DLQ+LQLISGMKAR +E SET  +Q ++N        
Sbjct: 104  VPYDDLAELEWLSNFVEESFSSEDLQRLQLISGMKARPDESSETRHFQSDDNNNGNVSNI 163

Query: 659  -RSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXGXXXXXXX 835
              +N +F+P+++VP KARSKRSRAAP NWA                              
Sbjct: 164  CNNNTMFNPEMAVPAKARSKRSRAAPGNWASRLLVLSRTTSSSEPEIIPGSTQHPNSGKK 223

Query: 836  XXXXEVA----DSGTGNSDGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPE 1003
                 V     D      DGRKCLHCATDKTPQWRTGP+GPKTLCNACGVR+KSGRLVPE
Sbjct: 224  TIKGAVGLKKRDGDVEGGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPE 283

Query: 1004 YRPASSPT 1027
            YRPA+SPT
Sbjct: 284  YRPAASPT 291


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