BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020360
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050253.1| Os03g0385900 [Oryza sativa Japonica Group] g...   111   9e-23
gb|AAT85310.1| small subunit ribosomal protein, putative [Oryza ...   111   9e-23
dbj|BAA12798.1| mitochondrial ribosomal protein S11 [Oryza sativ...   111   9e-23
ref|YP_005090385.1| ribosomal protein S11 (mitochondrion) [Phoen...   110   3e-22
ref|NP_001148535.1| ribosomal protein S11 containing protein [Ze...   110   3e-22

>ref|NP_001050253.1| Os03g0385900 [Oryza sativa Japonica Group]
           gi|108708513|gb|ABF96308.1| ribosomal protein S11
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113548724|dbj|BAF12167.1| Os03g0385900 [Oryza
           sativa Japonica Group] gi|215706382|dbj|BAG93238.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 332

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +1

Query: 43  QSNTFVTVTDSKGNKKTGASIGCLKDFKGKSRASKFAAKALAEHVGRSARNLGXXXXXXX 222
           ++ TFVTVTD +GNKKTGAS GCL+D KG+SR SK+AA+A AEHVGR+AR +G       
Sbjct: 219 RNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLKSVVMK 278

Query: 223 XXXXXXXXXXXQAILSFRDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLP 378
                      + ILSFR+GF      +   +  ++ I DVTQ+PHNGCRLP
Sbjct: 279 VKGTTFFNKKKKVILSFREGF---RGERVREQSPVVLIHDVTQLPHNGCRLP 327


>gb|AAT85310.1| small subunit ribosomal protein, putative [Oryza sativa Japonica
           Group]
          Length = 366

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +1

Query: 43  QSNTFVTVTDSKGNKKTGASIGCLKDFKGKSRASKFAAKALAEHVGRSARNLGXXXXXXX 222
           ++ TFVTVTD +GNKKTGAS GCL+D KG+SR SK+AA+A AEHVGR+AR +G       
Sbjct: 253 RNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLKSVVMK 312

Query: 223 XXXXXXXXXXXQAILSFRDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLP 378
                      + ILSFR+GF      +   +  ++ I DVTQ+PHNGCRLP
Sbjct: 313 VKGTTFFNKKKKVILSFREGF---RGERVREQSPVVLIHDVTQLPHNGCRLP 361


>dbj|BAA12798.1| mitochondrial ribosomal protein S11 [Oryza sativa Japonica Group]
           gi|125586487|gb|EAZ27151.1| hypothetical protein
           OsJ_11086 [Oryza sativa Japonica Group]
          Length = 254

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/112 (50%), Positives = 73/112 (65%)
 Frame = +1

Query: 43  QSNTFVTVTDSKGNKKTGASIGCLKDFKGKSRASKFAAKALAEHVGRSARNLGXXXXXXX 222
           ++ TFVTVTD +GNKKTGAS GCL+D KG+SR SK+AA+A AEHVGR+AR +G       
Sbjct: 141 RNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLKSVVMK 200

Query: 223 XXXXXXXXXXXQAILSFRDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLP 378
                      + ILSFR+GF      +   +  ++ I DVTQ+PHNGCRLP
Sbjct: 201 VKGTTFFNKKKKVILSFREGF---RGERVREQSPVVLIHDVTQLPHNGCRLP 249


>ref|YP_005090385.1| ribosomal protein S11 (mitochondrion) [Phoenix dactylifera]
           gi|343478437|gb|AEM43925.1| ribosomal protein S11
           (mitochondrion) [Phoenix dactylifera]
          Length = 171

 Score =  110 bits (274), Expect = 3e-22
 Identities = 58/114 (50%), Positives = 77/114 (67%)
 Frame = +1

Query: 37  ILQSNTFVTVTDSKGNKKTGASIGCLKDFKGKSRASKFAAKALAEHVGRSARNLGXXXXX 216
           ++++ TFVTVTD++GNKKTGAS GCL++ KG+SR S++AA+A AEHVGRSAR +G     
Sbjct: 27  LIKNKTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATAEHVGRSARKMGLKSVV 86

Query: 217 XXXXXXXXXXXXXQAILSFRDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLP 378
                        + ILS+R+GF  GE      +  I+ I DVTQ+PHNGCRLP
Sbjct: 87  MKVKGSTYFRKKNKVILSWREGFR-GEG--VGDQSPIMYIHDVTQLPHNGCRLP 137


>ref|NP_001148535.1| ribosomal protein S11 containing protein [Zea mays]
           gi|195620090|gb|ACG31875.1| ribosomal protein S11
           containing protein [Zea mays]
           gi|223973845|gb|ACN31110.1| unknown [Zea mays]
           gi|413948359|gb|AFW81008.1| Ribosomal protein S11
           containing protein isoform 1 [Zea mays]
           gi|413948360|gb|AFW81009.1| Ribosomal protein S11
           containing protein isoform 2 [Zea mays]
          Length = 252

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/112 (50%), Positives = 72/112 (64%)
 Frame = +1

Query: 43  QSNTFVTVTDSKGNKKTGASIGCLKDFKGKSRASKFAAKALAEHVGRSARNLGXXXXXXX 222
           +  TFVTVTDS GNKKTGAS GCL+D KG+SR S++A++A+AE VGRSAR +G       
Sbjct: 139 RKKTFVTVTDSSGNKKTGASAGCLEDRKGRSRLSRYASEAVAEQVGRSARKMGLSSIVMK 198

Query: 223 XXXXXXXXXXXQAILSFRDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLP 378
                      + ILSFR+GF      +   +  I+ I DVTQ+PHNGCRLP
Sbjct: 199 VKGASFFKKKKKVILSFREGF---RGERVRDQSPIMYIHDVTQLPHNGCRLP 247