BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020347
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...    75   6e-12
gb|AFK47046.1| unknown [Lotus japonicus]                               74   1e-11

>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/74 (52%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   MEKILQSMEVNPEIIMDWKSYATAANGYIKVGLIDKALQMLKNLEKLITGKQGRVAYDFL 182
           +EK L+ +E +P +++DW +YAT ANGY KVGL+DKAL+MLK  E+LITG++    YD+L
Sbjct: 236 LEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYL 295

Query: 183 LRTYAGATRSKEDL 224
           +  YA  T +KED+
Sbjct: 296 MTQYA-TTGTKEDV 308


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = +3

Query: 3   MEKILQSMEVNPEIIMDWKSYATAANGYIKVGLIDKALQMLKNLEKLITGKQGRVAYDFL 182
           +EK L  ME +P + +DW SY  AA GYIKVGL+DKAL+ML+  E+L+TGK+   AYD L
Sbjct: 249 IEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERLVTGKRRGTAYDSL 308

Query: 183 LRTYAGATRSKEDL 224
           +  YA   ++ E L
Sbjct: 309 ITLYAATGKTNEVL 322


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/74 (51%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   MEKILQSMEVNPEIIMDWKSYATAANGYIKVGLIDKALQMLKNLEKLITGKQGRVAYDFL 182
           ++ I+  ME +P II+DW SYA  A+GY+KVGL+DK L M+K LE+LI  K   VA+D L
Sbjct: 238 IDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAKGSNVAFDNL 297

Query: 183 LRTYAGATRSKEDL 224
           L+ YA  TR +++L
Sbjct: 298 LKLYA-ETRQRDEL 310


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +3

Query: 3   MEKILQSMEVNPEIIMDWKSYATAANGYIKVGLIDKALQMLKNLEKLITGKQGRVAYDFL 182
           MEK+L  MEV+P I + + +Y  AANGY+K GL+DK L MLK  E+LI+G   R AY+FL
Sbjct: 229 MEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFL 288

Query: 183 LRTYAGATRSKEDLY 227
           L  Y  A+ +K ++Y
Sbjct: 289 LTLYT-ASGNKAEVY 302


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/75 (48%), Positives = 53/75 (70%)
 Frame = +3

Query: 3   MEKILQSMEVNPEIIMDWKSYATAANGYIKVGLIDKALQMLKNLEKLITGKQGRVAYDFL 182
           MEK+L  ME +P   +DW +Y+TAANGY+K G ++KAL  LK  E+ + GK+ R+AY+ L
Sbjct: 223 MEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESL 282

Query: 183 LRTYAGATRSKEDLY 227
             TYA A  +K+++Y
Sbjct: 283 QSTYA-AIGNKDEVY 296