BLASTX nr result

ID: Coptis21_contig00020343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020343
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526110.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
gb|AFK40399.1| unknown [Lotus japonicus]                               74   2e-11
ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago ...    73   2e-11
ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|XP_002526110.1| conserved hypothetical protein [Ricinus communis]
           gi|223534607|gb|EEF36304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
 Frame = -3

Query: 449 TLKRKCSRTTKLHSLLCNRRNTYKNFVNVGRREEKQVG---------VLEKLEALKNLIP 297
           ++K+K     K  S+L  RR   +  ++V RR  K+           V  KLEALKNLIP
Sbjct: 11  SMKQKKKTPRKRTSILERRR---RRLIHVRRRLCKKAQRSSTCSSSKVSHKLEALKNLIP 67

Query: 296 TKNEETRKADQLFEETADYIVFLRTQVEVLQRLIDIYGSN 177
             N E  KADQLF+ETADYIV LRTQV VLQRLI  YGS+
Sbjct: 68  ANNGEIVKADQLFQETADYIVLLRTQVFVLQRLIQFYGSS 107


>gb|AFK40399.1| unknown [Lotus japonicus]
          Length = 116

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
 Frame = -3

Query: 449 TLKRKCSRTTKLHSLLCNRRNTYKNFVNVGRREEKQVGV------LEKLEALKNLIPTKN 288
           ++KR  +R  +       RR T  N  ++GR  +  V V       +KL+ALK+LIPT N
Sbjct: 12  SVKRATNRRRRQQHHQQRRRRT--NSPSIGRSFKTMVQVESKSKLSQKLQALKDLIPTHN 69

Query: 287 EETRKADQLFEETADYIVFLRTQVEVLQRLIDIYGSN 177
            E  K DQLF+ETADYIV LRT+V VLQ+LI+ YG+N
Sbjct: 70  GEMVKPDQLFKETADYIVLLRTRVLVLQKLIEYYGNN 106


>ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago truncatula]
           gi|355493737|gb|AES74940.1| hypothetical protein
           MTR_6g015150 [Medicago truncatula]
           gi|388512729|gb|AFK44426.1| unknown [Medicago
           truncatula]
          Length = 97

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/53 (62%), Positives = 46/53 (86%)
 Frame = -3

Query: 329 EKLEALKNLIPTKNEETRKADQLFEETADYIVFLRTQVEVLQRLIDIYGSNEQ 171
           +KL+ALKNLIP+ N +  K D+LF+ETADYIVFLRT+V +LQ+L++IYG+N +
Sbjct: 37  QKLKALKNLIPSNNGDEVKTDELFKETADYIVFLRTRVLILQKLVEIYGNNTE 89


>ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|222849033|gb|EEE86580.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 335 VLEKLEALKNLIPTKNEETRKADQLFEETADYIVFLRTQVEVLQRLIDIYGSNEQK 168
           V +K+EALKNLIP  +    KADQLF+ETADYIV LRTQV VL+ LID YGS+ ++
Sbjct: 46  VSDKMEALKNLIPATHNGEVKADQLFQETADYIVLLRTQVLVLKGLIDFYGSSTER 101


>ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|222867108|gb|EEF04239.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -3

Query: 335 VLEKLEALKNLIPTK--NEETRKADQLFEETADYIVFLRTQVEVLQRLIDIYGSNEQKK 165
           V +KLEALKNLIP    N E  K DQLF+ETADYI+ LRTQV +LQ L++ YGS+  ++
Sbjct: 46  VSDKLEALKNLIPATCHNGEIVKPDQLFKETADYILLLRTQVVLLQGLVEFYGSSTPER 104


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