BLASTX nr result
ID: Coptis21_contig00020342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020342 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arab... 79 3e-13 emb|CAA75349.1| ERT2 [Arabidopsis thaliana] 79 5e-13 ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [... 79 5e-13 ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 emb|CBI31056.3| unnamed protein product [Vitis vinifera] 71 1e-10 >ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arabidopsis lyrata subsp. lyrata] gi|297313707|gb|EFH44130.1| hypothetical protein ARALYDRAFT_492798 [Arabidopsis lyrata subsp. lyrata] Length = 421 Score = 79.3 bits (194), Expect = 3e-13 Identities = 40/64 (62%), Positives = 47/64 (73%) Frame = +1 Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384 MP PWKK +S R+SRFV+D++ S KHG SLVV+TGFPTSLIDL VKNR RL K Sbjct: 1 MPLPWKKSKSS-------RISRFVSDLQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53 Query: 385 KKSK 396 + SK Sbjct: 54 QSSK 57 >emb|CAA75349.1| ERT2 [Arabidopsis thaliana] Length = 407 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/64 (62%), Positives = 46/64 (71%) Frame = +1 Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384 MP PWKK +S R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNR RL K Sbjct: 1 MPLPWKKSKSS-------RISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53 Query: 385 KKSK 396 + SK Sbjct: 54 QSSK 57 >ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [Arabidopsis thaliana] gi|5262778|emb|CAB45883.1| ethylene-regulated transcript 2 (ERT2) [Arabidopsis thaliana] gi|7268884|emb|CAB79088.1| ethylene-regulated transcript 2 (ERT2) [Arabidopsis thaliana] gi|26452095|dbj|BAC43137.1| putative ethylene-regulated transcript 2 ERT2 [Arabidopsis thaliana] gi|332658971|gb|AEE84371.1| ethylene-responsive/regulated nuclear protein [Arabidopsis thaliana] Length = 405 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/64 (62%), Positives = 46/64 (71%) Frame = +1 Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384 MP PWKK +S R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNR RL K Sbjct: 1 MPLPWKKSKSS-------RISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53 Query: 385 KKSK 396 + SK Sbjct: 54 QSSK 57 >ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|222872114|gb|EEF09245.1| predicted protein [Populus trichocarpa] Length = 487 Score = 71.2 bits (173), Expect = 8e-11 Identities = 38/64 (59%), Positives = 44/64 (68%) Frame = +1 Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384 MPFPWKK+ K+ R SR VAD++S K G SLVV+TGFPTSL+DL VKNR RL K Sbjct: 1 MPFPWKKD-------KVARFSRIVADLQSP-KRGNSLVVETGFPTSLVDLFVKNRERLKK 52 Query: 385 KKSK 396 K Sbjct: 53 PTGK 56 >emb|CBI31056.3| unnamed protein product [Vitis vinifera] Length = 543 Score = 70.9 bits (172), Expect = 1e-10 Identities = 39/71 (54%), Positives = 47/71 (66%) Frame = +1 Query: 184 SFSCFKNMPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVK 363 SF MP PWK N ++ R+SRFVAD++S K G SLVV+TGFPTSLIDL VK Sbjct: 42 SFVAETGMPLPWK-------NARVGRISRFVADLQSP-KRGGSLVVETGFPTSLIDLFVK 93 Query: 364 NRYRLNKKKSK 396 NR RL K + + Sbjct: 94 NRDRLKKPRKR 104