BLASTX nr result

ID: Coptis21_contig00020342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020342
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arab...    79   3e-13
emb|CAA75349.1| ERT2 [Arabidopsis thaliana]                            79   5e-13
ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [...    79   5e-13
ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CBI31056.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arabidopsis lyrata subsp.
           lyrata] gi|297313707|gb|EFH44130.1| hypothetical protein
           ARALYDRAFT_492798 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/64 (62%), Positives = 47/64 (73%)
 Frame = +1

Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384
           MP PWKK  +S       R+SRFV+D++ S KHG SLVV+TGFPTSLIDL VKNR RL K
Sbjct: 1   MPLPWKKSKSS-------RISRFVSDLQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53

Query: 385 KKSK 396
           + SK
Sbjct: 54  QSSK 57


>emb|CAA75349.1| ERT2 [Arabidopsis thaliana]
          Length = 407

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/64 (62%), Positives = 46/64 (71%)
 Frame = +1

Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384
           MP PWKK  +S       R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNR RL K
Sbjct: 1   MPLPWKKSKSS-------RISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53

Query: 385 KKSK 396
           + SK
Sbjct: 54  QSSK 57


>ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [Arabidopsis
           thaliana] gi|5262778|emb|CAB45883.1| ethylene-regulated
           transcript 2 (ERT2) [Arabidopsis thaliana]
           gi|7268884|emb|CAB79088.1| ethylene-regulated transcript
           2 (ERT2) [Arabidopsis thaliana]
           gi|26452095|dbj|BAC43137.1| putative ethylene-regulated
           transcript 2 ERT2 [Arabidopsis thaliana]
           gi|332658971|gb|AEE84371.1|
           ethylene-responsive/regulated nuclear protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/64 (62%), Positives = 46/64 (71%)
 Frame = +1

Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384
           MP PWKK  +S       R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNR RL K
Sbjct: 1   MPLPWKKSKSS-------RISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKK 53

Query: 385 KKSK 396
           + SK
Sbjct: 54  QSSK 57


>ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|222872114|gb|EEF09245.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/64 (59%), Positives = 44/64 (68%)
 Frame = +1

Query: 205 MPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRYRLNK 384
           MPFPWKK+       K+ R SR VAD++S  K G SLVV+TGFPTSL+DL VKNR RL K
Sbjct: 1   MPFPWKKD-------KVARFSRIVADLQSP-KRGNSLVVETGFPTSLVDLFVKNRERLKK 52

Query: 385 KKSK 396
              K
Sbjct: 53  PTGK 56


>emb|CBI31056.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = +1

Query: 184 SFSCFKNMPFPWKKENNSHSNKKITRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVK 363
           SF     MP PWK       N ++ R+SRFVAD++S  K G SLVV+TGFPTSLIDL VK
Sbjct: 42  SFVAETGMPLPWK-------NARVGRISRFVADLQSP-KRGGSLVVETGFPTSLIDLFVK 93

Query: 364 NRYRLNKKKSK 396
           NR RL K + +
Sbjct: 94  NRDRLKKPRKR 104