BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020339
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...    66   1e-08
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...    61   3e-07
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    57   9e-06

>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
 Frame = +1

Query: 385 RKLPSWASTASTQSNGYIGS-SRNHQLPQRASSSVEWHSNHNHSSQVKLQKHP-SSTYRD 558
           R LP WA+  +T+ + Y G  SR     + A+SS    SN  + SQVK Q  P SST   
Sbjct: 25  RTLPQWAT--NTEKSSYNGGWSRRDSSSRGANSSNPSSSNVYNHSQVKPQTLPVSSTNTL 82

Query: 559 HMTFADRPVNDFHVEDVDGS----VSSHHKDISGNVFGKFSSQQYLKRCLPQSLQ----- 711
           +   A R    +H  + + S    VSS   +I G  + K SSQQ  KR LP SLQ     
Sbjct: 83  NHRIARRDEPSYHALNGNTSQQQTVSSRISNIHGADYEKMSSQQAFKRTLPSSLQPSATR 142

Query: 712 ----SPASTSKAKSSMENGGVIQVSDALRKSYLPFASNIIDPKVHPKDNLGGKANDASGR 879
               S AS S+ ++  +N    Q+ DA +        +    + + ++N G   ++    
Sbjct: 143 ALPSSFASDSRLRNLKDNASSSQLHDAYKNRPHGVGPSTSSDRGYIRENFGRGYDEDRFL 202

Query: 880 YDHTGGRLLPSSLAHEKLL 936
           Y + G R+LPS L   K++
Sbjct: 203 YQNGGNRILPSPLMLGKVI 221


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 6/194 (3%)
 Frame = +1

Query: 385 RKLPSWASTAST--QSNGYIGSSRNHQLPQRA----SSSVEWHSNHNHSSQVKLQKHPSS 546
           R LP WA+ A+T  +S+GY   ++    P+R      SS  WHS++  SS     +   S
Sbjct: 34  RILPPWAAIATTDSRSSGYGRQTQRDTSPKRPYSSNGSSSNWHSSNGGSSNWHTSQADDS 93

Query: 547 TYRDHMTFADRPVNDFHVEDVDGSVSSHHKDISGNVFGKFSSQQYLKRCLPQSLQSPAST 726
            Y      A  P           +V+S   ++ G  + K SSQQ LKR LP SL     +
Sbjct: 94  LYAIGNGNAGLP----------RTVNSRIANVYGTDYEKLSSQQALKRTLPSSLHRSPIS 143

Query: 727 SKAKSSMENGGVIQVSDALRKSYLPFASNIIDPKVHPKDNLGGKANDASGRYDHTGGRLL 906
           S + S +E     Q  D    +Y P       P        G    + +  Y   G R L
Sbjct: 144 SISNSLVEGVSSSQTRDIYGNAYHP-----AGPSSSHSKGFGRGNYEEAITYVSNGSRTL 198

Query: 907 PSSLAHEKLLPNVQ 948
           P SL   K  P+ Q
Sbjct: 199 PPSLMRGKSTPSAQ 212


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 36/116 (31%), Positives = 58/116 (50%)
 Frame = +1

Query: 616 SVSSHHKDISGNVFGKFSSQQYLKRCLPQSLQSPASTSKAKSSMENGGVIQVSDALRKSY 795
           +V+S   ++SG  + K SSQQ LKR LP SL     ++KA +++EN       D    +Y
Sbjct: 40  AVNSQIANVSGADYEKLSSQQALKRTLPSSLHPSEPSNKANNTVENASSSGSRDIYGNAY 99

Query: 796 LPFASNIIDPKVHPKDNLGGKANDASGRYDHTGGRLLPSSLAHEKLLPNVQSAGSS 963
                ++ + + + +D    + ND    Y++ G R+ P S  H K  P+ Q  G S
Sbjct: 100 HLAGPSVTNSRGYTRDIHSKRNNDDIMMYENNGSRIPPPSFMHGK--PSAQFPGPS 153