BLASTX nr result

ID: Coptis21_contig00020325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020325
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275536.2| PREDICTED: uncharacterized protein LOC100245...    74   1e-11
emb|CBI40035.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002518393.1| vacuolar protein sorting-associated protein,...    60   2e-07

>ref|XP_002275536.2| PREDICTED: uncharacterized protein LOC100245550 [Vitis vinifera]
          Length = 4054

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = -3

Query: 347  ADLKYISFHINIGDDEDDSMVIILHLTDIDILCALQEAMECWLSIKMVEISSCISTGESI 168
            A+L+ ++ H+N+ +D  +S V++L   ++DI   L E  EC +S+K + IS+    G+  
Sbjct: 1437 ANLESVNVHVNLENDGANSSVLMLSQRELDIRYGLTEFEECMVSLKALNISTYSLGGDRE 1496

Query: 167  SHTLCSTRNLYTMDSATQ--PKTGVGTGIFDCAERSASAGGCFLLHYQAQGSV 15
            SH LCS+  L    S  Q   + G+G  I +C +   S   CFLLHY+A  SV
Sbjct: 1497 SHNLCSSYKLLDTSSGHQHDQQFGLGNKIDNCGDSGTSIDECFLLHYEASRSV 1549


>emb|CBI40035.3| unnamed protein product [Vitis vinifera]
          Length = 2796

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/111 (33%), Positives = 57/111 (51%)
 Frame = -3

Query: 347 ADLKYISFHINIGDDEDDSMVIILHLTDIDILCALQEAMECWLSIKMVEISSCISTGESI 168
           A+L+ ++ H+N+ +D  +S V++L   ++DI   L E  EC +S+K + IS+    G+  
Sbjct: 510 ANLESVNVHVNLENDGANSSVLMLSQRELDIRYGLTEFEECMVSLKALNISTYSLGGDRE 569

Query: 167 SHTLCSTRNLYTMDSATQPKTGVGTGIFDCAERSASAGGCFLLHYQAQGSV 15
           SH LCS+  L   +S T                  S   CFLLHY+A  SV
Sbjct: 570 SHNLCSSYKLLDTNSGT------------------SIDECFLLHYEASRSV 602


>ref|XP_002518393.1| vacuolar protein sorting-associated protein, putative [Ricinus
            communis] gi|223542238|gb|EEF43780.1| vacuolar protein
            sorting-associated protein, putative [Ricinus communis]
          Length = 3482

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = -3

Query: 347  ADLKYISFHINIGDDEDDSMVIILHLTDIDILCALQEAMECWLSIKMVEISSCISTGESI 168
            A LK +SFH+++  DE+ S  + + L + DI  +  E  EC++  K +++++  S GE+ 
Sbjct: 846  AKLKSMSFHVDLAKDEESSSELTILLQESDICYSHTEFEECFVFTKALKVTTSPSKGEND 905

Query: 167  SHTLCSTRNLYTMDSATQPKTGVGTGIFD--CAERSASAGGCFLLHYQAQGSV 15
            S  L S+ N +   +A     G G    D  C+++  S+ G F LHY+    V
Sbjct: 906  SCILLSSENQFASGTAHFKDLGFGNSNQDSNCSDKDLSSEGSFQLHYKGHKGV 958


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