BLASTX nr result

ID: Coptis21_contig00020318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020318
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233872.1| mitochondrial small heat shock protein [Sola...    66   3e-09
gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum ...    65   6e-09
ref|XP_004172503.1| PREDICTED: small heat shock protein, chlorop...    64   1e-08
ref|XP_004147203.1| PREDICTED: small heat shock protein, chlorop...    64   1e-08
gb|ADU55787.1| HSP23.5 [Citrullus lanatus]                             62   5e-08

>ref|NP_001233872.1| mitochondrial small heat shock protein [Solanum lycopersicum]
           gi|3492854|dbj|BAA32547.1| mitochondrial small heat
           shock protein [Solanum lycopersicum]
          Length = 210

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/79 (53%), Positives = 51/79 (64%)
 Frame = +1

Query: 1   SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180
           ++ LRRA  TAS+L  N+  N +RS     S  RSFNTN QMT YDQDD G +D+DRR  
Sbjct: 3   TLALRRA--TASSLF-NRLVNPVRSA----SAFRSFNTNTQMTAYDQDDRG-VDVDRRSD 54

Query: 181 YATRRYDSPASFFSDVFDP 237
            +  R D+  S FSDVFDP
Sbjct: 55  RSVSRRDAFPSLFSDVFDP 73


>gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum annuum]
          Length = 211

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180
           S+ LRRA+++    L N+  N +RS     SV RSFNTN QMT YD DD  S++++RRP 
Sbjct: 4   SLALRRATTSP---LFNRLVNPVRSA----SVFRSFNTNTQMTTYDDDDR-SVEVERRPD 55

Query: 181 YA-TRRYDSPASFFSDVFDP 237
            + +RR D   SFFSDVFDP
Sbjct: 56  RSVSRRQDGLPSFFSDVFDP 75


>ref|XP_004172503.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 212

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   SVVLRRASSTASTLLKNKSFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDHGSLDIDRRP 177
           S+ LRR +++++T    K FN +RS +V PS V RSFNTNAQMT YD DD  S+D+D R 
Sbjct: 4   SIALRRLAASSAT----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDR-SVDVDSRS 58

Query: 178 GYATRRYDSPASFFSDVFDP 237
             +  R       F DVFDP
Sbjct: 59  DRSLSRSRDRYPGFGDVFDP 78


>ref|XP_004147203.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 201

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   SVVLRRASSTASTLLKNKSFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDHGSLDIDRRP 177
           S+ LRR +++++T    K FN +RS +V PS V RSFNTNAQMT YD DD  S+D+D R 
Sbjct: 4   SIALRRLAASSAT----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDR-SVDVDSRS 58

Query: 178 GYATRRYDSPASFFSDVFDP 237
             +  R       F DVFDP
Sbjct: 59  DRSLSRSRDRYPGFGDVFDP 78


>gb|ADU55787.1| HSP23.5 [Citrullus lanatus]
          Length = 210

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/79 (45%), Positives = 49/79 (62%)
 Frame = +1

Query: 1   SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180
           S+ LRR +++++     K F+ +RS +V PSV RSFNTNAQMT Y  DD  S+D+DR   
Sbjct: 4   SIALRRLAASSAA----KLFSPVRSASVLPSVGRSFNTNAQMTNYADDDR-SVDVDRGSD 58

Query: 181 YATRRYDSPASFFSDVFDP 237
            +  R       F+DVFDP
Sbjct: 59  RSISRSRDRFPGFADVFDP 77


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