BLASTX nr result
ID: Coptis21_contig00020318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020318 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001233872.1| mitochondrial small heat shock protein [Sola... 66 3e-09 gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum ... 65 6e-09 ref|XP_004172503.1| PREDICTED: small heat shock protein, chlorop... 64 1e-08 ref|XP_004147203.1| PREDICTED: small heat shock protein, chlorop... 64 1e-08 gb|ADU55787.1| HSP23.5 [Citrullus lanatus] 62 5e-08 >ref|NP_001233872.1| mitochondrial small heat shock protein [Solanum lycopersicum] gi|3492854|dbj|BAA32547.1| mitochondrial small heat shock protein [Solanum lycopersicum] Length = 210 Score = 65.9 bits (159), Expect = 3e-09 Identities = 42/79 (53%), Positives = 51/79 (64%) Frame = +1 Query: 1 SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180 ++ LRRA TAS+L N+ N +RS S RSFNTN QMT YDQDD G +D+DRR Sbjct: 3 TLALRRA--TASSLF-NRLVNPVRSA----SAFRSFNTNTQMTAYDQDDRG-VDVDRRSD 54 Query: 181 YATRRYDSPASFFSDVFDP 237 + R D+ S FSDVFDP Sbjct: 55 RSVSRRDAFPSLFSDVFDP 73 >gb|ADJ57588.1| mitochondrial small heat shock protein [Capsicum annuum] Length = 211 Score = 65.1 bits (157), Expect = 6e-09 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 1/80 (1%) Frame = +1 Query: 1 SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180 S+ LRRA+++ L N+ N +RS SV RSFNTN QMT YD DD S++++RRP Sbjct: 4 SLALRRATTSP---LFNRLVNPVRSA----SVFRSFNTNTQMTTYDDDDR-SVEVERRPD 55 Query: 181 YA-TRRYDSPASFFSDVFDP 237 + +RR D SFFSDVFDP Sbjct: 56 RSVSRRQDGLPSFFSDVFDP 75 >ref|XP_004172503.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis sativus] Length = 212 Score = 64.3 bits (155), Expect = 1e-08 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +1 Query: 1 SVVLRRASSTASTLLKNKSFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDHGSLDIDRRP 177 S+ LRR +++++T K FN +RS +V PS V RSFNTNAQMT YD DD S+D+D R Sbjct: 4 SIALRRLAASSAT----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDR-SVDVDSRS 58 Query: 178 GYATRRYDSPASFFSDVFDP 237 + R F DVFDP Sbjct: 59 DRSLSRSRDRYPGFGDVFDP 78 >ref|XP_004147203.1| PREDICTED: small heat shock protein, chloroplastic-like [Cucumis sativus] Length = 201 Score = 64.3 bits (155), Expect = 1e-08 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +1 Query: 1 SVVLRRASSTASTLLKNKSFNSLRSTAVAPS-VQRSFNTNAQMTEYDQDDHGSLDIDRRP 177 S+ LRR +++++T K FN +RS +V PS V RSFNTNAQMT YD DD S+D+D R Sbjct: 4 SIALRRLAASSAT----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDR-SVDVDSRS 58 Query: 178 GYATRRYDSPASFFSDVFDP 237 + R F DVFDP Sbjct: 59 DRSLSRSRDRYPGFGDVFDP 78 >gb|ADU55787.1| HSP23.5 [Citrullus lanatus] Length = 210 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/79 (45%), Positives = 49/79 (62%) Frame = +1 Query: 1 SVVLRRASSTASTLLKNKSFNSLRSTAVAPSVQRSFNTNAQMTEYDQDDHGSLDIDRRPG 180 S+ LRR +++++ K F+ +RS +V PSV RSFNTNAQMT Y DD S+D+DR Sbjct: 4 SIALRRLAASSAA----KLFSPVRSASVLPSVGRSFNTNAQMTNYADDDR-SVDVDRGSD 58 Query: 181 YATRRYDSPASFFSDVFDP 237 + R F+DVFDP Sbjct: 59 RSISRSRDRFPGFADVFDP 77