BLASTX nr result

ID: Coptis21_contig00020313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020313
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318664.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_003601195.1| Primary amine oxidase [Medicago truncatula] ...    64   2e-08
ref|XP_002273532.2| PREDICTED: copper methylamine oxidase-like [...    64   2e-08
ref|XP_003527002.1| PREDICTED: copper methylamine oxidase-like [...    63   3e-08
ref|XP_002527922.1| copper amine oxidase, putative [Ricinus comm...    62   5e-08

>ref|XP_002318664.1| predicted protein [Populus trichocarpa] gi|222859337|gb|EEE96884.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +2

Query: 170 LDTLPEPSSAKPLPI-IMMRAQSSHPLDPLSAAEISXXXXXXXXXXXXPEVRDSMRFIEV 346
           +D+LPEPS      I +M+RAQ+SHPLDPLSAAEIS            PE+RDSMRF+EV
Sbjct: 51  VDSLPEPSKTASAVIPVMLRAQTSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFVEV 110


>ref|XP_003601195.1| Primary amine oxidase [Medicago truncatula]
           gi|355490243|gb|AES71446.1| Primary amine oxidase
           [Medicago truncatula]
          Length = 769

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/64 (57%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = +2

Query: 167 PLDTLPEPSSAKPLP----IIMMRAQSSHPLDPLSAAEISXXXXXXXXXXXXPEVRDSMR 334
           PLD+LPEPSS           M R QSSHPLDPLSAAEIS            PE+RDSMR
Sbjct: 45  PLDSLPEPSSTNAPTSKGITSMTRPQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMR 104

Query: 335 FIEV 346
           FIEV
Sbjct: 105 FIEV 108


>ref|XP_002273532.2| PREDICTED: copper methylamine oxidase-like [Vitis vinifera]
           gi|296083412|emb|CBI23365.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = +2

Query: 170 LDTLPEPSS----AKPLPIIMMRAQSSHPLDPLSAAEISXXXXXXXXXXXXPEVRDSMRF 337
           +D+LP+P++     K +PI M+RAQ+SHPLDPLSAAEIS            PEVRDSMRF
Sbjct: 56  VDSLPQPAANPTATKGIPI-MLRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRF 114

Query: 338 IEV 346
           +EV
Sbjct: 115 VEV 117


>ref|XP_003527002.1| PREDICTED: copper methylamine oxidase-like [Glycine max]
          Length = 774

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/67 (50%), Positives = 42/67 (62%)
 Frame = +2

Query: 146 TALISNAPLDTLPEPSSAKPLPIIMMRAQSSHPLDPLSAAEISXXXXXXXXXXXXPEVRD 325
           TA +++ P  +    S+AK +   M RAQSSHPLDPLSAAEIS            PE+RD
Sbjct: 47  TAAVTDVPRISSTNASAAKGVVAAMPRAQSSHPLDPLSAAEISVAVATVRAAGSTPELRD 106

Query: 326 SMRFIEV 346
           SMRFIE+
Sbjct: 107 SMRFIEI 113


>ref|XP_002527922.1| copper amine oxidase, putative [Ricinus communis]
           gi|223532697|gb|EEF34479.1| copper amine oxidase,
           putative [Ricinus communis]
          Length = 795

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/66 (54%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
 Frame = +2

Query: 167 PLDTL------PEPSSAKPLPIIMMRAQSSHPLDPLSAAEISXXXXXXXXXXXXPEVRDS 328
           P+D+L      P P SAK +P  M RAQ+SHPLDPL+AAEIS            PEVRDS
Sbjct: 73  PVDSLTDPTPPPNPVSAKGIPT-MTRAQTSHPLDPLTAAEISVAVATVRAAGATPEVRDS 131

Query: 329 MRFIEV 346
           MRF+EV
Sbjct: 132 MRFVEV 137


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