BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020306
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   221   4e-56
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              221   4e-56
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...   213   1e-53
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   212   3e-53
ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago tr...   202   2e-50

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/136 (80%), Positives = 118/136 (86%)
 Frame = -2

Query: 411 MSQFWKPGTEKPQILDDEEGGILXXXXXXXXXXXXXXXSIEKQRQRLPVYKYRNAILYLV 232
           MSQFWKPG+EKP++LDDEEGG+L               +IEKQRQRLPVYKYR AILYLV
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEKQRQRLPVYKYRTAILYLV 60

Query: 231 ETHATSIIVGETGSGKTTQIPQYLNEAGWAEGGRVIACTQPRRLAVQAVASRVAEEMGVK 52
           ETHAT+IIVGETGSGKTTQIPQYL EAGWA+GGRVIACTQPRRLAVQAVASRVAEEMGVK
Sbjct: 61  ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK 120

Query: 51  LGEEVGYVIRFEDLTK 4
           LGEEVGY IRFEDL+K
Sbjct: 121 LGEEVGYTIRFEDLSK 136


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/136 (80%), Positives = 118/136 (86%)
 Frame = -2

Query: 411 MSQFWKPGTEKPQILDDEEGGILXXXXXXXXXXXXXXXSIEKQRQRLPVYKYRNAILYLV 232
           MSQFWKPG+EKP++LDDEEGG+L               +IEKQRQRLPVYKYR AILYLV
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYSNIEKQRQRLPVYKYRTAILYLV 60

Query: 231 ETHATSIIVGETGSGKTTQIPQYLNEAGWAEGGRVIACTQPRRLAVQAVASRVAEEMGVK 52
           ETHAT+IIVGETGSGKTTQIPQYL EAGWA+GGRVIACTQPRRLAVQAVASRVAEEMGVK
Sbjct: 61  ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK 120

Query: 51  LGEEVGYVIRFEDLTK 4
           LGEEVGY IRFEDL+K
Sbjct: 121 LGEEVGYTIRFEDLSK 136


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score =  213 bits (543), Expect = 1e-53
 Identities = 109/138 (78%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 MSQFWKPGTEKPQILDDEEGGILXXXXXXXXXXXXXXXS-IEKQRQRLPVYKYRNAILYL 235
           M+QFWKPGTEKP++LDD EGG+L               S  EKQRQRLPVYKYR AILYL
Sbjct: 1   MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSSGFGFSSTEKQRQRLPVYKYRTAILYL 60

Query: 234 VETHATSIIVGETGSGKTTQIPQYLNEAGWAEGGRVIACTQPRRLAVQAVASRVAEEMGV 55
           VETHAT+IIVGETGSGKTTQIPQ+L EAGWA+GGRVIACTQPRRLAVQAVASRVAEEMGV
Sbjct: 61  VETHATTIIVGETGSGKTTQIPQFLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGV 120

Query: 54  KLGEEVGYVIRFEDLTKP 1
           KLGEEVGY IRFEDLT P
Sbjct: 121 KLGEEVGYTIRFEDLTNP 138


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  212 bits (539), Expect = 3e-53
 Identities = 107/136 (78%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
 Frame = -2

Query: 411 MSQFWKPGTEKPQILDDEEGGILXXXXXXXXXXXXXXXS-IEKQRQRLPVYKYRNAILYL 235
           M+ FWKPGTEKP +LDDEEGG++                 IEKQRQRLPVYKYR AILYL
Sbjct: 1   MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYVSIEKQRQRLPVYKYRTAILYL 60

Query: 234 VETHATSIIVGETGSGKTTQIPQYLNEAGWAEGGRVIACTQPRRLAVQAVASRVAEEMGV 55
           VETHATS+IVGETGSGKTTQIPQYL EAGWA+GGR+IACTQPRRLAVQAVASRVAEEMGV
Sbjct: 61  VETHATSVIVGETGSGKTTQIPQYLKEAGWADGGRLIACTQPRRLAVQAVASRVAEEMGV 120

Query: 54  KLGEEVGYVIRFEDLT 7
           KLGEEVGY IRFEDLT
Sbjct: 121 KLGEEVGYTIRFEDLT 136


>ref|XP_003593709.1| ATP-dependent RNA helicase dhx8 [Medicago truncatula]
           gi|355482757|gb|AES63960.1| ATP-dependent RNA helicase
           dhx8 [Medicago truncatula]
          Length = 701

 Score =  202 bits (515), Expect = 2e-50
 Identities = 103/141 (73%), Positives = 116/141 (82%), Gaps = 6/141 (4%)
 Frame = -2

Query: 411 MSQFWKPGTEKP--QILDDEEGGILXXXXXXXXXXXXXXXS----IEKQRQRLPVYKYRN 250
           M+QFWKPGTEKP  Q++DDEEGG+L                    I+KQRQRLPVYKYRN
Sbjct: 1   MAQFWKPGTEKPEAQVVDDEEGGVLFIPGASSFSSSSSSGYGYASIDKQRQRLPVYKYRN 60

Query: 249 AILYLVETHATSIIVGETGSGKTTQIPQYLNEAGWAEGGRVIACTQPRRLAVQAVASRVA 70
           AILYLVETH+T+IIVGETGSGKTTQIPQYL EAGWA GGR+IACTQPRRLAVQAV+SRVA
Sbjct: 61  AILYLVETHSTTIIVGETGSGKTTQIPQYLIEAGWASGGRLIACTQPRRLAVQAVSSRVA 120

Query: 69  EEMGVKLGEEVGYVIRFEDLT 7
           +EMGVKLG++VGY IRFED+T
Sbjct: 121 QEMGVKLGDQVGYTIRFEDVT 141