BLASTX nr result

ID: Coptis21_contig00020297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020297
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23633.3| unnamed protein product [Vitis vinifera]              157   8e-37
ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-...   157   8e-37
ref|XP_002521967.1| conserved hypothetical protein [Ricinus comm...   156   1e-36
ref|XP_002272470.1| PREDICTED: uncharacterized protein LOC100246...   155   2e-36
ref|XP_002884200.1| hypothetical protein ARALYDRAFT_900393 [Arab...   155   3e-36

>emb|CBI23633.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = +1

Query: 97  KMKGGNQNQCLTMHQPWASLLVHGIKRIEGRSWPATLRGRLWIHAAAKVPDSATIKTMEE 276
           + KG   N CLT+HQPWASLLV+GIKR+EGRSWPA LRGRLWIHAA+KVPDS TIK ME 
Sbjct: 4   RSKGNYTNPCLTLHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKVPDSDTIKAMEN 63

Query: 277 FYREIYAVNGITDLKFPENYPVSRLLGC 360
           FYREIYAVNGI DLKFPE+YPVSRLLGC
Sbjct: 64  FYREIYAVNGIADLKFPEHYPVSRLLGC 91


>ref|XP_002281254.1| PREDICTED: activating signal cointegrator 1-like [Vitis vinifera]
          Length = 266

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = +1

Query: 97  KMKGGNQNQCLTMHQPWASLLVHGIKRIEGRSWPATLRGRLWIHAAAKVPDSATIKTMEE 276
           + KG   N CLT+HQPWASLLV+GIKR+EGRSWPA LRGRLWIHAA+KVPDS TIK ME 
Sbjct: 4   RSKGNYTNPCLTLHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKVPDSDTIKAMEN 63

Query: 277 FYREIYAVNGITDLKFPENYPVSRLLGC 360
           FYREIYAVNGI DLKFPE+YPVSRLLGC
Sbjct: 64  FYREIYAVNGIADLKFPEHYPVSRLLGC 91


>ref|XP_002521967.1| conserved hypothetical protein [Ricinus communis]
           gi|223538771|gb|EEF40371.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +1

Query: 91  REKMKGGNQNQCLTMHQPWASLLVHGIKRIEGRSWPATLRGRLWIHAAAKVPDSATIKTM 270
           R +  G   N CLTMHQPWASLLV+GIKRIEGRSWP+ +RGRLWIHAA+KVP+ ATIK M
Sbjct: 2   RGRSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPSPVRGRLWIHAASKVPEEATIKAM 61

Query: 271 EEFYREIYAVNGITDLKFPENYPVSRLLGC 360
           E+FYREIYAVNGITD+KFPE+YPVSRLLGC
Sbjct: 62  EDFYREIYAVNGITDIKFPEHYPVSRLLGC 91


>ref|XP_002272470.1| PREDICTED: uncharacterized protein LOC100246193 [Vitis vinifera]
           gi|296087873|emb|CBI35156.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/89 (79%), Positives = 79/89 (88%)
 Frame = +1

Query: 94  EKMKGGNQNQCLTMHQPWASLLVHGIKRIEGRSWPATLRGRLWIHAAAKVPDSATIKTME 273
           E+     +N CLTMHQPWASLLV+GIKRIEGRSWPA +RGRLWIHAA+KVPD AT+K ME
Sbjct: 3   ERNSWNYRNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRGRLWIHAASKVPDEATVKAME 62

Query: 274 EFYREIYAVNGITDLKFPENYPVSRLLGC 360
           EFY+EIYAV+GI DLKFPENYPVSRLLGC
Sbjct: 63  EFYKEIYAVDGIYDLKFPENYPVSRLLGC 91


>ref|XP_002884200.1| hypothetical protein ARALYDRAFT_900393 [Arabidopsis lyrata subsp.
           lyrata] gi|297330040|gb|EFH60459.1| hypothetical protein
           ARALYDRAFT_900393 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score =  155 bits (392), Expect = 3e-36
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = +1

Query: 103 KGGNQNQCLTMHQPWASLLVHGIKRIEGRSWPATLRGRLWIHAAAKVPDSATIKTMEEFY 282
           +G  +N CLTMHQPWASLLVHGIKRIEGRSWP+ +RGRLWIHAA+KVPD ATIK MEEFY
Sbjct: 3   RGNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRGRLWIHAASKVPDEATIKAMEEFY 62

Query: 283 REIYAVNGITDLKFPENYPVSRLLGC 360
           +EIYAV+GITD++FP++YPVSRL+GC
Sbjct: 63  QEIYAVDGITDIQFPQHYPVSRLIGC 88


Top