BLASTX nr result

ID: Coptis21_contig00020295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020295
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446089.1| hypothetical protein SORBIDRAFT_06g001580 [S...    78   1e-12
ref|XP_002528106.1| mitochondrial inner membrane protease subuni...    77   2e-12
gb|AFW57676.1| hypothetical protein ZEAMMB73_249952 [Zea mays] g...    76   4e-12
ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane prot...    76   5e-12
gb|ABK27122.1| unknown [Picea sitchensis]                              76   5e-12

>ref|XP_002446089.1| hypothetical protein SORBIDRAFT_06g001580 [Sorghum bicolor]
           gi|241937272|gb|EES10417.1| hypothetical protein
           SORBIDRAFT_06g001580 [Sorghum bicolor]
          Length = 163

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   GRCWVEGDNXXXXXXXXXFGPIPLGLIQGKVTHIVWPPQRAGAIEKRMS*GRLLP 165
           G CW+EGDN         +GP+P+GL+QG+VTHI+WPPQR G ++++M  GR++P
Sbjct: 108 GHCWIEGDNAALSLDSRSYGPVPMGLLQGRVTHIIWPPQRIGRVDRKMPEGRIMP 162


>ref|XP_002528106.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223532495|gb|EEF34285.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 170

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 1   GRCWVEGDNXXXXXXXXXFGPIPLGLIQGKVTHIVWPPQRAGAIEKRMS*GRL 159
           G CWVEGDN         FGP+PLGLI G+VTHIVWPPQR G +EK++  GRL
Sbjct: 115 GHCWVEGDNLLSSMDSRYFGPVPLGLISGRVTHIVWPPQRIGEVEKKIPQGRL 167


>gb|AFW57676.1| hypothetical protein ZEAMMB73_249952 [Zea mays]
           gi|413917745|gb|AFW57677.1| hypothetical protein
           ZEAMMB73_249952 [Zea mays]
          Length = 163

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = +1

Query: 1   GRCWVEGDNXXXXXXXXXFGPIPLGLIQGKVTHIVWPPQRAGAIEKRMS*GRLLP 165
           GRCWVEGDN         +GP+P+GL++G+VTHI+WPP R G ++++M  GR++P
Sbjct: 108 GRCWVEGDNAATSFDSRSYGPVPMGLLRGRVTHIIWPPHRIGRVDRKMPEGRIVP 162


>ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane protease subunit 2-like
           [Cucumis sativus] gi|449483475|ref|XP_004156603.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           2-like [Cucumis sativus]
          Length = 184

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = +1

Query: 1   GRCWVEGDNXXXXXXXXXFGPIPLGLIQGKVTHIVWPPQRAGAIEKRMS*GRLLP 165
           G CWVEGDN         FGPIP+GLIQG+V+HIVWPPQR GA+EK+   G   P
Sbjct: 115 GHCWVEGDNPECSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVEKKYPQGESNP 169


>gb|ABK27122.1| unknown [Picea sitchensis]
          Length = 170

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 1   GRCWVEGDNXXXXXXXXXFGPIPLGLIQGKVTHIVWPPQRAGAIEKRMS*GRLLPY 168
           G CWVEGDN         FGP+PLGL+QG+VTH++WPP+R GAIEK+    R+  Y
Sbjct: 115 GHCWVEGDNAVSSLDSRSFGPVPLGLVQGRVTHVIWPPERVGAIEKQYPKERVSSY 170


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